Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.325657
AI848615
expressed sequence AI848615
16
106274
Mm.325657
A2bp1
ataxin 2 binding protein 1
16
16 7.2 cM
268859
Mm.325657
R74919
expressed sequence R74919
16
98046
Mm.325657
1700123O21Rik
RIKEN cDNA 1700123O21 gene
16
16 4.6 cM
68238
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 46 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TCAGAGGTGT
(
9
)
1.6
0.0016
Cb medulloblastoma
TTAGCAACTC
(
4
)
27.7
0.0277
Cb medulloblastoma
TGCAGAGATG (
7
)
9.2
0.0092
P8 GC+1d culture
TGCAGAGATG (
7
)
8
0.008
P8 GC+1d culture
TTAGCAACTC
(
4
)
3.4
0.0034
P8 GC+1d culture
TGGATCATCA (
9
)
2.3
0.0023
P8 GC+SHH+1d culture
TGCAGAGATG (
7
)
3.5
0.0035
P8 GC+SHH+1d culture
TTAGCAACTC
(
4
)
3.5
0.0035
E15 cortex
GGTCTTCCTG
(
4
)
4.9
0.0049
P1 cortex
GGTCTTCCTG
(
4
)
13.6
0.0136
P1 cortex
TGCAGAGATG (
7
)
4.5
0.0045
P1 cortex
TTAGCAACTC
(
4
)
4.5
0.0045
Hypothalamus
TTAGCAACTC
(
4
)
10.9
0.0109
Hypothalamus
TCAGAGGTGT
(
9
)
5.4
0.0054
Hypothalamus
TGCAGAGATG (
7
)
5.4
0.0054
Hypothalamus
TGGATCATCA (
9
)
5.4
0.0054
Hypothalamus
AAGCTACTGG
(
4
)
1.8
0.0018
Hypothalamus
GCCTCAGCCT (
11
)
1.8
0.0018
Hypothalamus
GGTCTTCCTG
(
4
)
1.8
0.0018
E12.5 retina
TGCAGAGATG (
7
)
1.9
0.0019
E16.5 retina
TTAGCAACTC
(
4
)
3.6
0.0036
E16.5 retina
AAGCTACTGG
(
4
)
1.8
0.0018
E16.5 retina
AATTATGGAA
(
11
)
1.8
0.0018
E16.5 retina
GCCTCAGCCT (
11
)
1.8
0.0018
E16.5 retina
TGGATCATCA (
9
)
1.8
0.0018
E18.5 retina
AAGCTACTGG
(
4
)
3.6
0.0036
E18.5 retina
TTAGCAACTC
(
4
)
1.8
0.0018
P0.5 retina
TGGATCATCA (
9
)
5.9
0.0059
P2.5 retina
AATTATGGAA
(
11
)
1.8
0.0018
P2.5 retina
TTAGCAACTC
(
4
)
1.8
0.0018
P4.5 retina
TCAGAGGTGT
(
9
)
4
0.004
P4.5 retina
TGGATCATCA (
9
)
2
0.002
P4.5 retina
TTAGCAACTC
(
4
)
2
0.002
P6.5 retina
TTAGCAACTC
(
4
)
3.3
0.0033
P6.5 retina
TGGATCATCA (
9
)
1.7
0.0017
P10.5 crx- retina
TGCAGAGATG (
7
)
5.6
0.0056
P10.5 crx- retina
TCAGAGGTGT
(
9
)
3.7
0.0037
P10.5 crx- retina
AATTATGGAA
(
11
)
1.9
0.0019
P10.5 crx- retina
GCCTCAGCCT (
11
)
1.9
0.0019
P10.5 crx- retina
TTAGCAACTC
(
4
)
1.9
0.0019
P10.5 crx+ retina
TGCAGAGATG (
7
)
5.8
0.0058
P10.5 crx+ retina
TTAGCAACTC
(
4
)
3.8
0.0038
Adult retinal
GGTCTTCCTG
(
4
)
1.9
0.0019
Adult retinal
TTAGCAACTC
(
4
)
1.9
0.0019
ONL
TGCAGAGATG (
7
)
3.8
0.0038
ONL
GGTCTTCCTG
(
4
)
1.9
0.0019
