Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.32584
4921501M20Rik
RIKEN cDNA 4921501M20 gene
15
74039
Gene Ontology
integral to membrane
Human Homolog
NFAM1[NFAT activation molecule 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 48 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAATGCCTT
(
6
)
13.1
0.0131
P8 Cb GC
AAGTTCAGAA (
4
)
11.4
0.0114
Cb medulloblastoma
GGTGGCTTGT (
2
)
4.6
0.0046
Cb medulloblastoma
AAAATGCCTT
(
6
)
2.3
0.0023
P8 GC+1d culture
AAAATGCCTT
(
6
)
9.1
0.0091
P8 GC+1d culture
AAGTTCAGAA (
4
)
3.4
0.0034
P8 GC+1d culture
GTGTTCCTGG (
6
)
2.3
0.0023
P8 GC+1d culture
GCTGGTTGAT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAATGCCTT
(
6
)
14.1
0.0141
P8 GC+SHH+1d culture
AAGTTCAGAA (
4
)
5.9
0.0059
P8 GC+SHH+1d culture
GTGTTCCTGG (
6
)
3.5
0.0035
3T3 fibroblasts
GTGTTCCTGG (
6
)
3.5
0.0035
E15 cortex
AAAATGCCTT
(
6
)
4.9
0.0049
Hypothalamus
AAAATGCCTT
(
6
)
12.7
0.0127
Hypothalamus
GCTGGTTGAT
(
2
)
1.8
0.0018
Hypothalamus
GTGTTCCTGG (
6
)
1.8
0.0018
E12.5 retina
AAGTTCAGAA (
4
)
24.4
0.0244
E12.5 retina
AAAATGCCTT
(
6
)
3.8
0.0038
E12.5 retina
GTGTTCCTGG (
6
)
3.8
0.0038
E12.5 retina
GGTGGCTTGT (
2
)
1.9
0.0019
E14.5 retina
AAAATGCCTT
(
6
)
3.6
0.0036
E14.5 retina
AAGTTCAGAA (
4
)
3.6
0.0036
E14.5 retina
GTGTTCCTGG (
6
)
1.8
0.0018
E16.5 retina
AAGTTCAGAA (
4
)
9.1
0.0091
E16.5 retina
AAAATGCCTT
(
6
)
1.8
0.0018
E16.5 retina
GTGTTCCTGG (
6
)
1.8
0.0018
E18.5 retina
AAGTTCAGAA (
4
)
14.6
0.0146
E18.5 retina
AAAATGCCTT
(
6
)
9.1
0.0091
P0.5 retina
AAGTTCAGAA (
4
)
5.9
0.0059
P0.5 retina
AAAATGCCTT
(
6
)
3.9
0.0039
P2.5 retina
AAAATGCCTT
(
6
)
17.6
0.0176
P2.5 retina
AAGTTCAGAA (
4
)
7
0.007
P2.5 retina
GCTGGTTGAT
(
2
)
1.8
0.0018
P4.5 retina
AAAATGCCTT
(
6
)
9.9
0.0099
P4.5 retina
AAGTTCAGAA (
4
)
4
0.004
P6.5 retina
AAAATGCCTT
(
6
)
8.3
0.0083
P6.5 retina
AAGTTCAGAA (
4
)
3.3
0.0033
P6.5 retina
GCTGGTTGAT
(
2
)
1.7
0.0017
P6.5 retina
GTGTTCCTGG (
6
)
1.7
0.0017
P10.5 crx- retina
AAGTTCAGAA (
4
)
11.1
0.0111
P10.5 crx- retina
AAAATGCCTT
(
6
)
7.4
0.0074
P10.5 crx+ retina
AAAATGCCTT
(
6
)
5.8
0.0058
P10.5 crx+ retina
AAGTTCAGAA (
4
)
1.9
0.0019
Adult retinal
AAAATGCCTT
(
6
)
5.6
0.0056
Adult retinal
AAGTTCAGAA (
4
)
1.9
0.0019
Adult retinal
GCTGGTTGAT
(
2
)
1.9
0.0019
ONL
AAAATGCCTT
(
6
)
9.6
0.0096
ONL
AAGTTCAGAA (
4
)
3.8
0.0038
