Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.326089
Top3b
topoisomerase (DNA) III beta
16
21976
Mm.326089
1700048G13Rik
RIKEN cDNA 1700048G13 gene
16
78624
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 61 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CACCGAGGTG
(
2
)
1.6
0.0016
P8 Cb GC
GTAAAGTCCT (
3
)
1.6
0.0016
P8 Cb GC
TGGTTACTGG (
10
)
1.6
0.0016
Cb medulloblastoma
GCCAAAATCC (
5
)
11.6
0.0116
Cb medulloblastoma
GTAAAGTCCT (
3
)
2.3
0.0023
P8 GC+1d culture
GCCAAAATCC (
5
)
5.7
0.0057
P8 GC+1d culture
GTAAAGTCCT (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GCCAAAATCC (
5
)
4.7
0.0047
P8 GC+SHH+1d culture
TGGTTACTGG (
10
)
2.3
0.0023
P8 GC+SHH+1d culture
CACCGAGGTG
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GTCAAGTTCC
(
5
)
1.2
0.0012
3T3 fibroblasts
GCCAAAATCC (
5
)
21
0.021
3T3 fibroblasts
GTCAAGTTCC
(
5
)
7
0.007
3T3 fibroblasts
CACCGAGGTG
(
2
)
3.5
0.0035
E15 cortex
TGGTTACTGG (
10
)
9.9
0.0099
E15 cortex
CACCGAGGTG
(
2
)
4.9
0.0049
P1 cortex
GCCAAAATCC (
5
)
9.1
0.0091
Hypothalamus
GCCAAAATCC (
5
)
5.4
0.0054
Hypothalamus
CAGCCTCCTG (
5
)
1.8
0.0018
Hypothalamus
TGGTTACTGG (
10
)
1.8
0.0018
E12.5 retina
CACCGAGGTG
(
2
)
5.6
0.0056
E12.5 retina
CAGCCTCCTG (
5
)
1.9
0.0019
E12.5 retina
TGGTTACTGG (
10
)
1.9
0.0019
E14.5 retina
TGGTTACTGG (
10
)
14.6
0.0146
E14.5 retina
GTAAAGTCCT (
3
)
3.6
0.0036
E14.5 retina
CACCGAGGTG
(
2
)
1.8
0.0018
E14.5 retina
GCCAAAATCC (
5
)
1.8
0.0018
E14.5 retina
GGGTGGGAGG
(
5
)
1.8
0.0018
E16.5 retina
TGGTTACTGG (
10
)
19.9
0.0199
E16.5 retina
CACCGAGGTG
(
2
)
3.6
0.0036
E16.5 retina
GCCAAAATCC (
5
)
1.8
0.0018
E16.5 retina
GTAAAGTCCT (
3
)
1.8
0.0018
E18.5 retina
GATGCCCCCC (
6
)
25.5
0.0255
E18.5 retina
GCCAAAATCC (
5
)
3.6
0.0036
E18.5 retina
CAGCCTCCTG (
5
)
1.8
0.0018
E18.5 retina
GGGTGGGAGG
(
5
)
1.8
0.0018
E18.5 retina
TGGTTACTGG (
10
)
1.8
0.0018
P0.5 retina
GCCAAAATCC (
5
)
5.9
0.0059
P0.5 retina
CACCGAGGTG
(
2
)
3.9
0.0039
P0.5 retina
TGGTTACTGG (
10
)
2
0.002
P2.5 retina
CACCGAGGTG
(
2
)
3.5
0.0035
P2.5 retina
GCCAAAATCC (
5
)
3.5
0.0035
P2.5 retina
GTAAAGTCCT (
3
)
1.8
0.0018
P2.5 retina
TGGTTACTGG (
10
)
1.8
0.0018
P4.5 retina
CACCGAGGTG
(
2
)
4
0.004
P4.5 retina
GCCAAAATCC (
5
)
2
0.002
P6.5 retina
GCCAAAATCC (
5
)
10
0.01
P6.5 retina
CACCGAGGTG
(
2
)
3.3
0.0033
P6.5 retina
GGGTGGGAGG
(
5
)
1.7
0.0017
P6.5 retina
GTAAAGTCCT (
3
)
1.7
0.0017
P10.5 crx- retina
CACCGAGGTG
(
2
)
7.4
0.0074
P10.5 crx- retina
TGGTTACTGG (
10
)
3.7
0.0037
P10.5 crx- retina
GCCAAAATCC (
5
)
1.9
0.0019
P10.5 crx+ retina
GCCAAAATCC (
5
)
1.9
0.0019
P10.5 crx+ retina
TGGTTACTGG (
10
)
1.9
0.0019
Adult retinal
GCCAAAATCC (
5
)
20.4
0.0204
Adult retinal
CACCGAGGTG
(
2
)
1.9
0.0019
Adult retinal
GTAAAGTCCT (
3
)
1.9
0.0019
ONL
GCCAAAATCC (
5
)
7.7
0.0077
ONL
TGGTTACTGG (
10
)
7.7
0.0077
ONL
GGGTGGGAGG
(
5
)
1.9
0.0019
