Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.327442	Ldb1	LIM domain binding 1	19	19 C3 (19 46.0 cM)	16825
Gene Ontology	anterior/posterior axis specification | development | gastrulation (sensu Mammalia) | nucleus | transcription cofactor activity | Wnt receptor signaling pathway
Human Homolog	LDB1[LIM domain binding 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 26 In Situ Hybridization Images

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SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTCCAGGTG (2) 68.5 0.0685 P8 Cb GC AGCTGCTGAA (4) 1.6 0.0016 P8 Cb GC TGGATGCCTG (4) 1.6 0.0016 Cb medulloblastoma TTTCCAGGTG (2) 104.1 0.1041 Cb medulloblastoma TGGATGCCTG (4) 6.9 0.0069 Cb medulloblastoma CTGACCATCA (2) 2.3 0.0023 Cb medulloblastoma GCTGACCAGC 2.3 0.0023 Cb medulloblastoma GGGGAAGGGG (6) 2.3 0.0023 P8 GC+1d culture TTTCCAGGTG (2) 86.8 0.0868 P8 GC+1d culture TGGATGCCTG (4) 16 0.016 P8 GC+1d culture GGGGAAGGGG (6) 1.1 0.0011 P8 GC+1d culture TACCCACCTA (5) 1.1 0.0011 P8 GC+SHH+1d culture TTTCCAGGTG (2) 69.1 0.0691 P8 GC+SHH+1d culture TGGATGCCTG (4) 2.3 0.0023 P8 GC+SHH+1d culture AGCTCGGGGG 1.2 0.0012 3T3 fibroblasts TGGATGCCTG (4) 10.5 0.0105 3T3 fibroblasts TTTCCAGGTG (2) 10.5 0.0105 3T3 fibroblasts GGGGAAGGGG (6) 3.5 0.0035 E15 cortex TTTCCAGGTG (2) 44.5 0.0445 E15 cortex TGGATGCCTG (4) 19.8 0.0198 E15 cortex AGCTCGGGGG 4.9 0.0049 E15 cortex AGCTGCTGAA (4) 4.9 0.0049 P1 cortex TTTCCAGGTG (2) 50 0.05 P1 cortex TGGATGCCTG (4) 9.1 0.0091 Hypothalamus TTTCCAGGTG (2) 121.4 0.1214 Hypothalamus CAGCCAGGAC 5.4 0.0054 Hypothalamus GCTGACCAGC 3.6 0.0036 Hypothalamus TGGATGCTGT (2) 1.8 0.0018 E12.5 retina TTTCCAGGTG (2) 69.5 0.0695 E12.5 retina TGGATGCCTG (4) 7.5 0.0075 E12.5 retina TACCCACCTA (5) 1.9 0.0019 E14.5 retina TTTCCAGGTG (2) 74.7 0.0747 E14.5 retina TGGATGCTGT (2) 3.6 0.0036 E14.5 retina AGTACCCCCT (3) 1.8 0.0018 E14.5 retina CAGCCAGGAC 1.8 0.0018 E14.5 retina CTGACCATCA (2) 1.8 0.0018 E16.5 retina TTTCCAGGTG (2) 119.5 0.1195 E16.5 retina CTGACCATCA (2) 1.8 0.0018 E16.5 retina TGGATGCCTG (4) 1.8 0.0018 E18.5 retina TTTCCAGGTG (2) 121.9 0.1219 E18.5 retina TGGATGCCTG (4) 5.5 0.0055 P0.5 retina TTTCCAGGTG (2) 74.6 0.0746 P0.5 retina TGGATGCCTG (4) 21.6 0.0216 P0.5 retina AGTACCCCCT (3) 2 0.002 P2.5 retina TTTCCAGGTG (2) 112.6 0.1126 P2.5 retina TGGATGCCTG (4) 7 0.007 P2.5 retina AGCTCGGGGG 1.8 0.0018 P2.5 retina CAGCCAGGAC 1.8 0.0018 P2.5 retina GGGGAAGGGG (6) 1.8 0.0018 P2.5 retina TACCCACCTA (5) 1.8 0.0018 P4.5 retina TTTCCAGGTG (2) 97.1 0.0971 P4.5 retina TGGATGCCTG (4) 11.9 0.0119 P4.5 retina GGGGAAGGGG (6) 2 0.002 P6.5 retina TTTCCAGGTG (2) 83.4 0.0834 P6.5 retina TGGATGCCTG (4) 10 0.01 P10.5 crx- retina TTTCCAGGTG (2) 50.2 0.0502 P10.5 crx- retina TGGATGCCTG (4) 9.3 0.0093 P10.5 crx- retina AGCTCGGGGG 1.9 0.0019 P10.5 crx- retina AGTACCCCCT (3) 1.9 0.0019 P10.5 crx+ retina TTTCCAGGTG (2) 75 0.075 P10.5 crx+ retina TGGATGCCTG (4) 1.9 0.0019 Adult retinal TTTCCAGGTG (2) 29.6 0.0296 Adult retinal TGGATGCCTG (4) 7.4 0.0074 Adult retinal AGCTGCTGAA (4) 1.9 0.0019 ONL TTTCCAGGTG (2) 46 0.046 ONL GGGGAAGGGG (6) 1.9 0.0019