Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.328072	Pvrl3	poliovirus receptor-related 3	16		58998
Gene Ontology	cell adhesion | cell-cell adherens junction | cell-cell adhesion | extracellular space | integral to membrane | intercellular junction | protein binding | receptor activity
Human Homolog	PVRL3[poliovirus receptor-related 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 53 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCCTTTTCTA (3) 32.6 0.0326 P8 Cb GC TCTAACTCTG (6) 3.3 0.0033 Cb medulloblastoma TACAAAACAA (4) 2.3 0.0023 Cb medulloblastoma TCTAACTCTG (6) 2.3 0.0023 P8 GC+1d culture TCCTTTTCTA (3) 22.8 0.0228 P8 GC+1d culture TCTAACTCTG (6) 4.6 0.0046 P8 GC+1d culture TACAAAACAA (4) 3.4 0.0034 P8 GC+1d culture AGCTAAAATT (2) 2.3 0.0023 P8 GC+SHH+1d culture TCCTTTTCTA (3) 41 0.041 P8 GC+SHH+1d culture TCTAACTCTG (6) 7 0.007 P8 GC+SHH+1d culture AGCTAAAATT (2) 1.2 0.0012 P8 GC+SHH+1d culture ATATGTTTCC (2) 1.2 0.0012 P8 GC+SHH+1d culture TACCCGTTTG 1.2 0.0012 P1 cortex TCCTTTTCTA (3) 27.3 0.0273 P1 cortex AGCTAAAATT (2) 4.5 0.0045 Hypothalamus ATATGTTTCC (2) 1.8 0.0018 Hypothalamus TACAAAACAA (4) 1.8 0.0018 Hypothalamus TCCTTTTCTA (3) 1.8 0.0018 E12.5 retina TCCTTTTCTA (3) 5.6 0.0056 E12.5 retina ATATGTTTCC (2) 1.9 0.0019 E12.5 retina TACAAAACAA (4) 1.9 0.0019 E14.5 retina TCCTTTTCTA (3) 38.3 0.0383 E14.5 retina TCTAACTCTG (6) 3.6 0.0036 E14.5 retina AGCTAAAATT (2) 1.8 0.0018 E14.5 retina ATATGTTTCC (2) 1.8 0.0018 E16.5 retina TCCTTTTCTA (3) 23.5 0.0235 E16.5 retina TCTAACTCTG (6) 3.6 0.0036 E16.5 retina ATATGTTTCC (2) 1.8 0.0018 E16.5 retina TACAAAACAA (4) 1.8 0.0018 E16.5 retina TACCCGTTTG 1.8 0.0018 E18.5 retina TCCTTTTCTA (3) 18.2 0.0182 E18.5 retina TCTAACTCTG (6) 5.5 0.0055 E18.5 retina TACAAAACAA (4) 3.6 0.0036 P0.5 retina TCCTTTTCTA (3) 2 0.002 P2.5 retina TCCTTTTCTA (3) 7 0.007 P2.5 retina TACAAAACAA (4) 5.3 0.0053 P2.5 retina TCTAACTCTG (6) 3.5 0.0035 P2.5 retina ATATGTTTCC (2) 1.8 0.0018 P2.5 retina TACCCGTTTG 1.8 0.0018 P4.5 retina TCCTTTTCTA (3) 13.9 0.0139 P4.5 retina TCTAACTCTG (6) 4 0.004 P4.5 retina ATATGTTTCC (2) 2 0.002 P6.5 retina TCCTTTTCTA (3) 3.3 0.0033 P10.5 crx- retina TCCTTTTCTA (3) 5.6 0.0056 P10.5 crx- retina TCTAACTCTG (6) 5.6 0.0056 P10.5 crx- retina TACAAAACAA (4) 3.7 0.0037 P10.5 crx+ retina TCTAACTCTG (6) 5.8 0.0058 P10.5 crx+ retina ATATGTTTCC (2) 1.9 0.0019 P10.5 crx+ retina TACAAAACAA (4) 1.9 0.0019 Adult retinal TACAAAACAA (4) 1.9 0.0019 ONL ATATGTTTCC (2) 1.9 0.0019 ONL TACAAAACAA (4) 1.9 0.0019 ONL TCTAACTCTG (6) 1.9 0.0019