Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.328698	Donson	downstream neighbor of SON	16		60364
Mm.328698	Son	Son cell proliferation protein	16	16 64.0 cM	20658
Gene Ontology	DNA binding | double-stranded RNA binding | intracellular | nucleic acid binding | nucleus | protein binding | RNA binding
Human Homolog	SON[SON DNA binding protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTATTACAG (5) 6.5 0.0065 P8 Cb GC CAATAGCATT (5) 1.6 0.0016 P8 Cb GC TGTGTATAAA (3) 1.6 0.0016 Cb medulloblastoma GCTGAGGGCC (4) 4.6 0.0046 Cb medulloblastoma TGTATTACAG (5) 2.3 0.0023 P8 GC+1d culture TGTATTACAG (5) 4.6 0.0046 P8 GC+1d culture TGTGTATAAA (3) 3.4 0.0034 P8 GC+SHH+1d culture TGTATTACAG (5) 11.7 0.0117 P8 GC+SHH+1d culture CAATAGCATT (5) 1.2 0.0012 P8 GC+SHH+1d culture TGTGTATAAA (3) 1.2 0.0012 3T3 fibroblasts TGTATTACAG (5) 7 0.007 3T3 fibroblasts GCTGAGGGCC (4) 3.5 0.0035 P1 cortex GCTGAGGGCC (4) 4.5 0.0045 Hypothalamus TGTATTACAG (5) 5.4 0.0054 Hypothalamus CTACATCCGA (2) 3.6 0.0036 Hypothalamus TGTGTATAAA (3) 1.8 0.0018 E12.5 retina TGTATTACAG (5) 18.8 0.0188 E12.5 retina TGTGTATAAA (3) 5.6 0.0056 E14.5 retina TGTATTACAG (5) 9.1 0.0091 E14.5 retina TGTGTATAAA (3) 3.6 0.0036 E14.5 retina GCTGAGGGCC (4) 1.8 0.0018 E16.5 retina TGTATTACAG (5) 12.7 0.0127 E16.5 retina TGTGTATAAA (3) 3.6 0.0036 E16.5 retina CAATAGCATT (5) 1.8 0.0018 E16.5 retina GCTGAGGGCC (4) 1.8 0.0018 E18.5 retina TGTGTATAAA (3) 10.9 0.0109 E18.5 retina TGTATTACAG (5) 7.3 0.0073 P0.5 retina TGTATTACAG (5) 11.8 0.0118 P0.5 retina TGTGTATAAA (3) 3.9 0.0039 P0.5 retina GCTGAGGGCC (4) 2 0.002 P2.5 retina TGTATTACAG (5) 17.6 0.0176 P2.5 retina TGTGTATAAA (3) 7 0.007 P4.5 retina TGTATTACAG (5) 23.8 0.0238 P4.5 retina TGTGTATAAA (3) 11.9 0.0119 P4.5 retina CTACATCCGA (2) 2 0.002 P6.5 retina TGTATTACAG (5) 11.7 0.0117 P10.5 crx- retina TGTATTACAG (5) 26 0.026 P10.5 crx- retina GCTGAGGGCC (4) 1.9 0.0019 P10.5 crx+ retina TGTATTACAG (5) 17.3 0.0173 P10.5 crx+ retina TGTGTATAAA (3) 1.9 0.0019 Adult retinal TGTATTACAG (5) 9.3 0.0093 Adult retinal CTACATCCGA (2) 3.7 0.0037 Adult retinal TGTGTATAAA (3) 1.9 0.0019 ONL TGTATTACAG (5) 3.8 0.0038 ONL TGTGTATAAA (3) 1.9 0.0019