Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.328872	Rab40c	Rab40c, member RAS oncogene family	17		224624
Gene Ontology	GTP binding | intracellular signaling cascade | protein transport | small GTPase mediated signal transduction
Human Homolog	RAB40C[RAB40C, member RAS oncogene family]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGAAGATCT (13) 19.6 0.0196 P8 Cb GC ATAAAAACAC (4) 6.5 0.0065 Cb medulloblastoma ATAAAAACAC (4) 18.5 0.0185 Cb medulloblastoma CAGGAAAAAA (3) 6.9 0.0069 Cb medulloblastoma GAGAAGATCT (13) 2.3 0.0023 P8 GC+1d culture ATAAAAACAC (4) 1.1 0.0011 P8 GC+1d culture GATGTTACTA 1.1 0.0011 P8 GC+SHH+1d culture ATAAAAACAC (4) 3.5 0.0035 P8 GC+SHH+1d culture GAGAAGATCT (13) 2.3 0.0023 P8 GC+SHH+1d culture GATGTTACTA 2.3 0.0023 P8 GC+SHH+1d culture CAGGAAAAAA (3) 1.2 0.0012 3T3 fibroblasts GAGAAGATCT (13) 7 0.007 E15 cortex GAGAAGATCT (13) 4.9 0.0049 P1 cortex ATAAAAACAC (4) 4.5 0.0045 Hypothalamus ATAAAAACAC (4) 3.6 0.0036 Hypothalamus CAGGAAAAAA (3) 3.6 0.0036 Hypothalamus GAGAAGATCT (13) 1.8 0.0018 E12.5 retina ATAAAAACAC (4) 5.6 0.0056 E12.5 retina GATGTTACTA 1.9 0.0019 E14.5 retina ATAAAAACAC (4) 1.8 0.0018 E14.5 retina CAGGAAAAAA (3) 1.8 0.0018 E14.5 retina GATGTTACTA 1.8 0.0018 E16.5 retina ATAAAAACAC (4) 3.6 0.0036 E16.5 retina GATGTTACTA 1.8 0.0018 E18.5 retina ATAAAAACAC (4) 5.5 0.0055 E18.5 retina CAGGAAAAAA (3) 5.5 0.0055 P0.5 retina ATAAAAACAC (4) 3.9 0.0039 P0.5 retina GATGTTACTA 3.9 0.0039 P2.5 retina CAGGAAAAAA (3) 5.3 0.0053 P2.5 retina ATAAAAACAC (4) 1.8 0.0018 P2.5 retina GATGTTACTA 1.8 0.0018 P4.5 retina ATAAAAACAC (4) 2 0.002 P4.5 retina GATGTTACTA 2 0.002 P6.5 retina ATAAAAACAC (4) 6.7 0.0067 P6.5 retina CAGGAAAAAA (3) 3.3 0.0033 P6.5 retina GAGAAGATCT (13) 1.7 0.0017 P6.5 retina GATGTTACTA 1.7 0.0017 P10.5 crx- retina ATAAAAACAC (4) 1.9 0.0019 P10.5 crx+ retina ATAAAAACAC (4) 3.8 0.0038 P10.5 crx+ retina GAGAAGATCT (13) 1.9 0.0019 Adult retinal CAGGAAAAAA (3) 1.9 0.0019 ONL ATAAAAACAC (4) 1.9 0.0019