Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.328945	Akap8	A kinase (PRKA) anchor protein 8	17		56399
Gene Ontology	DNA binding | kinase activity | nucleus
Human Homolog	AKAP8[A kinase (PRKA) anchor protein 8]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 102 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC GAAGATGAGC (4) 4.9 0.0049 P8 Cb GC TACTAGGTTT 3.3 0.0033 P8 Cb GC TGTTCTTTTT (4) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma TGTGCGAGAG (3) 4.6 0.0046 Cb medulloblastoma GGAGGCCACC (4) 2.3 0.0023 Cb medulloblastoma TACTAGGTTT 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture GGAGGCCACC (4) 6.8 0.0068 P8 GC+1d culture GAAGATGAGC (4) 5.7 0.0057 P8 GC+1d culture TACTAGGTTT 1.1 0.0011 P8 GC+1d culture TGTGCGAGAG (3) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture GGAGGCCACC (4) 9.4 0.0094 P8 GC+SHH+1d culture GAAGATGAGC (4) 5.9 0.0059 P8 GC+SHH+1d culture TGTGCGAGAG (3) 2.3 0.0023 P8 GC+SHH+1d culture TAGGATTAGG (2) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex GAAGATGAGC (4) 9.9 0.0099 E15 cortex GGAGGCCACC (4) 9.9 0.0099 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TACTAGGTTT 4.9 0.0049 E15 cortex TGTGCGAGAG (3) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex GAAGATGAGC (4) 13.6 0.0136 P1 cortex GGAGGCCACC (4) 9.1 0.0091 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus GAAGATGAGC (4) 10.9 0.0109 Hypothalamus GGAGGCCACC (4) 10.9 0.0109 Hypothalamus TACTAGGTTT 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina GGAGGCCACC (4) 5.6 0.0056 E12.5 retina GATGATGAAA (5) 3.8 0.0038 E12.5 retina TACTAGGTTT 3.8 0.0038 E12.5 retina TGTGCGAGAG (3) 3.8 0.0038 E12.5 retina TGTTCTTTTT (4) 3.8 0.0038 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina GGAGGCCACC (4) 5.5 0.0055 E14.5 retina CTGAGCCTCC (5) 1.8 0.0018 E14.5 retina GAAGATGAGC (4) 1.8 0.0018 E14.5 retina TAGGATTAGG (2) 1.8 0.0018 E14.5 retina TGTGCGAGAG (3) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina GGAGGCCACC (4) 5.4 0.0054 E16.5 retina TACTAGGTTT 1.8 0.0018 E16.5 retina TAGGATTAGG (2) 1.8 0.0018 E16.5 retina TGTGCGAGAG (3) 1.8 0.0018 E16.5 retina TGTTCTTTTT (4) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina GATGATGAAA (5) 7.3 0.0073 E18.5 retina GGAGGCCACC (4) 7.3 0.0073 E18.5 retina GAAGATGAGC (4) 1.8 0.0018 E18.5 retina TAGGATTAGG (2) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina GGAGGCCACC (4) 11.8 0.0118 P0.5 retina GAAGATGAGC (4) 9.8 0.0098 P0.5 retina TGTGCGAGAG (3) 5.9 0.0059 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina TGTGCGAGAG (3) 5.3 0.0053 P2.5 retina CTGAGCCTCC (5) 3.5 0.0035 P2.5 retina GGAGGCCACC (4) 3.5 0.0035 P2.5 retina GAAGATGAGC (4) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TAGGATTAGG (2) 1.8 0.0018 P2.5 retina TGTTCTTTTT (4) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina GGAGGCCACC (4) 7.9 0.0079 P4.5 retina GAAGATGAGC (4) 5.9 0.0059 P4.5 retina CTCTTTCTTT 4 0.004 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TAGGATTAGG (2) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina GAAGATGAGC (4) 5 0.005 P6.5 retina GGAGGCCACC (4) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TGTGCGAGAG (3) 3.3 0.0033 P6.5 retina TGTTCTTTTT (4) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina TGTGCGAGAG (3) 7.4 0.0074 P10.5 crx- retina CTCTTTCTTT 1.9 0.0019 P10.5 crx- retina GAAGATGAGC (4) 1.9 0.0019 P10.5 crx- retina GGAGGCCACC (4) 1.9 0.0019 P10.5 crx- retina TACTAGGTTT 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina GGAGGCCACC (4) 11.5 0.0115 P10.5 crx+ retina TGTGCGAGAG (3) 5.8 0.0058 P10.5 crx+ retina TACTAGGTTT 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal GAAGATGAGC (4) 14.8 0.0148 Adult retinal GGAGGCCACC (4) 14.8 0.0148 Adult retinal CTGAGCCTCC (5) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GAAGATGAGC (4) 7.7 0.0077 ONL GGAGGCCACC (4) 5.7 0.0057 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TGTGCGAGAG (3) 3.8 0.0038 ONL TACTAGGTTT 1.9 0.0019