Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.32911	Pscd4	pleckstrin homology, Sec7 and coiled/coil domains 4	15		72318
Human Homolog	PSCD4[pleckstrin homology, Sec7 and coiled-coil domains 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGTGTGTG (115) 27.7 0.0277 P8 Cb GC GGGAAGCCTG (5) 1.6 0.0016 Cb medulloblastoma TGTGTGTGTG (115) 30.1 0.0301 Cb medulloblastoma GGGGAGGGGG (10) 4.6 0.0046 P8 GC+1d culture TGTGTGTGTG (115) 27.4 0.0274 P8 GC+1d culture ACGTCGCTCG 1.1 0.0011 P8 GC+1d culture TCTGTCGGGG (2) 1.1 0.0011 P8 GC+SHH+1d culture TGTGTGTGTG (115) 28.1 0.0281 P8 GC+SHH+1d culture ACGTCGCTCG 1.2 0.0012 P8 GC+SHH+1d culture GGGGAGGGGG (10) 1.2 0.0012 P8 GC+SHH+1d culture TCTGTCGGGG (2) 1.2 0.0012 3T3 fibroblasts TGTGTGTGTG (115) 28 0.028 3T3 fibroblasts TCTGTCGGGG (2) 7 0.007 E15 cortex TCTGTCGGGG (2) 9.9 0.0099 P1 cortex TGTGTGTGTG (115) 18.2 0.0182 P1 cortex TCTGTCGGGG (2) 4.5 0.0045 Hypothalamus TGTGTGTGTG (115) 25.4 0.0254 Hypothalamus ACGTCGCTCG 5.4 0.0054 Hypothalamus GGGGAGGGGG (10) 5.4 0.0054 E12.5 retina TGTGTGTGTG (115) 43.2 0.0432 E12.5 retina GGGGAGGGGG (10) 7.5 0.0075 E12.5 retina ACGTCGCTCG 1.9 0.0019 E14.5 retina TGTGTGTGTG (115) 54.7 0.0547 E16.5 retina TGTGTGTGTG (115) 39.8 0.0398 E16.5 retina ACGTCGCTCG 1.8 0.0018 E16.5 retina GGGAAGCCTG (5) 1.8 0.0018 E16.5 retina GGGGAGGGAG (4) 1.8 0.0018 E18.5 retina TGTGTGTGTG (115) 47.3 0.0473 E18.5 retina GGGGAGGGAG (4) 1.8 0.0018 P0.5 retina TGTGTGTGTG (115) 21.6 0.0216 P0.5 retina TCTGTCGGGG (2) 2 0.002 P2.5 retina TGTGTGTGTG (115) 35.2 0.0352 P2.5 retina GGGGAGGGGG (10) 1.8 0.0018 P4.5 retina TGTGTGTGTG (115) 47.6 0.0476 P4.5 retina ACGTCGCTCG 2 0.002 P6.5 retina TGTGTGTGTG (115) 41.7 0.0417 P10.5 crx- retina TGTGTGTGTG (115) 59.4 0.0594 P10.5 crx- retina GGGAAGCCTG (5) 1.9 0.0019 P10.5 crx- retina GGGGAGGGAG (4) 1.9 0.0019 P10.5 crx+ retina TGTGTGTGTG (115) 44.2 0.0442 P10.5 crx+ retina GGGGAGGGGG (10) 3.8 0.0038 P10.5 crx+ retina ACGTCGCTCG 1.9 0.0019 Adult retinal TGTGTGTGTG (115) 53.7 0.0537 Adult retinal GGGGAGGGGG (10) 3.7 0.0037 Adult retinal TCTGTCGGGG (2) 1.9 0.0019 ONL TGTGTGTGTG (115) 23 0.023 ONL GGGGAGGGGG (10) 1.9 0.0019