Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.329963	Smap1	stromal membrane-associated protein 1	1		98366
Gene Ontology	cellular_component unknown | molecular_function unknown | positive regulation of erythrocyte differentiation
Human Homolog	SMAP1[stromal membrane-associated protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TACATAGTGC (2) 4.9 0.0049 P8 Cb GC ATGTCTAAGC (4) 3.3 0.0033 P8 Cb GC CAAGATATGG (2) 1.6 0.0016 P8 Cb GC GGAACGCACA (2) 1.6 0.0016 Cb medulloblastoma TACATAGTGC (2) 4.6 0.0046 Cb medulloblastoma ATGTCTAAGC (4) 2.3 0.0023 Cb medulloblastoma TTAGTAATAC (2) 2.3 0.0023 P8 GC+1d culture TACATAGTGC (2) 8 0.008 P8 GC+1d culture CAAGATATGG (2) 4.6 0.0046 P8 GC+1d culture ATGTCTAAGC (4) 3.4 0.0034 P8 GC+1d culture GGAACGCACA (2) 1.1 0.0011 P8 GC+SHH+1d culture TACATAGTGC (2) 2.3 0.0023 P8 GC+SHH+1d culture ATGTCTAAGC (4) 1.2 0.0012 P8 GC+SHH+1d culture CAAGATATGG (2) 1.2 0.0012 P8 GC+SHH+1d culture GCAGCCATCT (8) 1.2 0.0012 P8 GC+SHH+1d culture GGAACGCACA (2) 1.2 0.0012 3T3 fibroblasts AGAAGAGGCC 3.5 0.0035 3T3 fibroblasts ATGTCTAAGC (4) 3.5 0.0035 P1 cortex TACATAGTGC (2) 13.6 0.0136 P1 cortex ATGTCTAAGC (4) 4.5 0.0045 Hypothalamus ATGTCTAAGC (4) 9.1 0.0091 Hypothalamus GCAGCCATCT (8) 3.6 0.0036 Hypothalamus GGAACGCACA (2) 3.6 0.0036 E12.5 retina TACATAGTGC (2) 3.8 0.0038 E14.5 retina GCAGCCATCT (8) 9.1 0.0091 E14.5 retina CAAGATATGG (2) 3.6 0.0036 E14.5 retina TACATAGTGC (2) 3.6 0.0036 E14.5 retina AGAAGAGGCC 1.8 0.0018 E16.5 retina CAAGATATGG (2) 3.6 0.0036 E16.5 retina TACATAGTGC (2) 3.6 0.0036 E16.5 retina AGAAGAGGCC 1.8 0.0018 E16.5 retina GCAGCCATCT (8) 1.8 0.0018 E18.5 retina GCAGCCATCT (8) 3.6 0.0036 P0.5 retina CAAGATATGG (2) 3.9 0.0039 P0.5 retina GCAGCCATCT (8) 2 0.002 P0.5 retina TACATAGTGC (2) 2 0.002 P0.5 retina TTAGTAATAC (2) 2 0.002 P2.5 retina CAAGATATGG (2) 7 0.007 P2.5 retina TACATAGTGC (2) 1.8 0.0018 P4.5 retina TACATAGTGC (2) 4 0.004 P4.5 retina AGAAGAGGCC 2 0.002 P4.5 retina ATGTCTAAGC (4) 2 0.002 P6.5 retina CAAGATATGG (2) 1.7 0.0017 P10.5 crx- retina AGAAGAGGCC 1.9 0.0019 P10.5 crx- retina ATGTCTAAGC (4) 1.9 0.0019 P10.5 crx- retina TACATAGTGC (2) 1.9 0.0019 P10.5 crx+ retina CAAGATATGG (2) 3.8 0.0038 P10.5 crx+ retina GCAGCCATCT (8) 1.9 0.0019 P10.5 crx+ retina GGAACGCACA (2) 1.9 0.0019 P10.5 crx+ retina TACATAGTGC (2) 1.9 0.0019 Adult retinal ATGTCTAAGC (4) 7.4 0.0074 Adult retinal TACATAGTGC (2) 7.4 0.0074 Adult retinal CAAGATATGG (2) 1.9 0.0019 Adult retinal GCAGCCATCT (8) 1.9 0.0019 ONL ATGTCTAAGC (4) 3.8 0.0038 ONL TTAGTAATAC (2) 1.9 0.0019