Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.330075	Rpl7a	ribosomal protein L7a	2	2 18.0 cM	27176
Gene Ontology	structural constituent of ribosome
Human Homolog	RPL7A[ribosomal protein L7a]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 94 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACCACCGTT 73.4 0.0734 P8 Cb GC GGTTAATGTT (7) 11.4 0.0114 P8 Cb GC GGCAATCACC (3) 3.3 0.0033 Cb medulloblastoma CACCACCGTT 30.1 0.0301 Cb medulloblastoma GGTTAATGTT (7) 11.6 0.0116 Cb medulloblastoma GGCAATCACC (3) 4.6 0.0046 Cb medulloblastoma CAGCCCAAAA 2.3 0.0023 P8 GC+1d culture CACCACCGTT 68.5 0.0685 P8 GC+1d culture GGTTAATGTT (7) 9.1 0.0091 P8 GC+1d culture AGGAGGAGGT (4) 2.3 0.0023 P8 GC+1d culture GGCAATCACC (3) 2.3 0.0023 P8 GC+1d culture TATATGACAG (3) 2.3 0.0023 P8 GC+1d culture CACCACTGTT (2) 1.1 0.0011 P8 GC+1d culture CAGCCCAAAA 1.1 0.0011 P8 GC+SHH+1d culture CACCACCGTT 51.5 0.0515 P8 GC+SHH+1d culture GGCAATCACC (3) 3.5 0.0035 P8 GC+SHH+1d culture GGTTAATGTT (7) 3.5 0.0035 P8 GC+SHH+1d culture CAGCCCAAAA 1.2 0.0012 P8 GC+SHH+1d culture TACACACACT (5) 1.2 0.0012 P8 GC+SHH+1d culture TCTTCCTGTG (3) 1.2 0.0012 3T3 fibroblasts CACCACCGTT 273.4 0.2734 3T3 fibroblasts GGCAATCACC (3) 45.6 0.0456 E15 cortex CACCACCGTT 74.2 0.0742 E15 cortex CACCACCCGT (2) 9.9 0.0099 E15 cortex ACGTAGACCC (2) 4.9 0.0049 E15 cortex CAGCCCAAAA 4.9 0.0049 E15 cortex GGCAATCACC (3) 4.9 0.0049 E15 cortex GGTTAATGTT (7) 4.9 0.0049 P1 cortex CACCACCGTT 45.5 0.0455 P1 cortex GGCAATCACC (3) 27.3 0.0273 P1 cortex CACCACCGGT 9.1 0.0091 Hypothalamus CACCACCGTT 16.3 0.0163 Hypothalamus GGTTAATGTT (7) 7.2 0.0072 Hypothalamus AGGAGGAGGT (4) 5.4 0.0054 Hypothalamus GGCAATCACC (3) 5.4 0.0054 Hypothalamus TCTTCCTGTG (3) 1.8 0.0018 E12.5 retina CACCACCGTT 69.5 0.0695 E12.5 retina GGCAATCACC (3) 3.8 0.0038 E12.5 retina GGTTAATGTT (7) 3.8 0.0038 E12.5 retina TCTTCCTGTG (3) 1.9 0.0019 E14.5 retina CACCACCGTT 56.5 0.0565 E14.5 retina TCTTCCTGTG (3) 12.8 0.0128 E14.5 retina GGCAATCACC (3) 3.6 0.0036 E14.5 retina GGTTAATGTT (7) 3.6 0.0036 E14.5 retina ACGTAGACCC (2) 1.8 0.0018 E14.5 retina CACCACCGGT 1.8 0.0018 E14.5 retina CAGCCCAAAA 1.8 0.0018 E16.5 retina CACCACCGTT 61.6 0.0616 E16.5 retina GGTTAATGTT (7) 5.4 0.0054 E16.5 retina GGCAATCACC (3) 3.6 0.0036 E16.5 retina ACGTAGACCC (2) 1.8 0.0018 E16.5 retina CACCACCCGT (2) 1.8 0.0018 E16.5 retina TTTTCCTGTG 1.8 0.0018 E18.5 retina CACCACCGTT 45.5 0.0455 E18.5 retina GGTTAATGTT (7) 7.3 0.0073 E18.5 retina GGCAATCACC (3) 1.8 0.0018 P0.5 retina CACCACCGTT 98.1 0.0981 P0.5 retina AGGAGGAGGT (4) 3.9 0.0039 P0.5 retina GGCAATCACC (3) 3.9 0.0039 P0.5 retina CACCACTGTT (2) 2 0.002 P0.5 retina TATATGACAG (3) 2 0.002 P2.5 retina CACCACCGTT 21.1 0.0211 P2.5 retina GGTTAATGTT (7) 10.6 0.0106 P2.5 retina CAGCCCAAAA 3.5 0.0035 P2.5 retina CACCACCGGT 1.8 0.0018 P2.5 retina GGCAATCACC (3) 1.8 0.0018 P2.5 retina TCTTCCTGTG (3) 1.8 0.0018 P4.5 retina CACCACCGTT 21.8 0.0218 P4.5 retina GGTTAATGTT (7) 17.8 0.0178 P4.5 retina AGGAGGAGGT (4) 2 0.002 P4.5 retina CAGCCCAAAA 2 0.002 P4.5 retina TCTTCCTGTG (3) 2 0.002 P6.5 retina CACCACCGTT 55 0.055 P6.5 retina GGTTAATGTT (7) 10 0.01 P6.5 retina AGGAGGAGGT (4) 3.3 0.0033 P6.5 retina GGCAATCACC (3) 1.7 0.0017 P6.5 retina TCTTCCTGTG (3) 1.7 0.0017 P10.5 crx- retina CACCACCGTT 96.6 0.0966 P10.5 crx- retina GGTTAATGTT (7) 5.6 0.0056 P10.5 crx- retina ACGTAGACCC (2) 1.9 0.0019 P10.5 crx- retina CACCACCGGT 1.9 0.0019 P10.5 crx+ retina CACCACCGTT 48.1 0.0481 P10.5 crx+ retina GGTTAATGTT (7) 15.4 0.0154 P10.5 crx+ retina GGCAATCACC (3) 3.8 0.0038 Adult retinal CACCACCGTT 22.2 0.0222 Adult retinal GGTTAATGTT (7) 13 0.013 Adult retinal AGGAGGAGGT (4) 1.9 0.0019 Adult retinal GGCAATCACC (3) 1.9 0.0019 ONL CACCACCGTT 11.5 0.0115 ONL GGCAATCACC (3) 3.8 0.0038 ONL TACACACACT (5) 3.8 0.0038 ONL TTTTCCTGTG 3.8 0.0038 ONL AGGAGGAGGT (4) 1.9 0.0019 ONL CACCACTGTT (2) 1.9 0.0019