Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.330511
2810002D13Rik
RIKEN cDNA 2810002D13 gene
2
66606
Human Homolog
FLJ36812[hypothetical protein FLJ36812]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 55 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
TGCTATTTCT
1.6
0.0016
P8 Cb GC
TGGGGGAGGG
(
2
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
TGCTATTTCT
4.6
0.0046
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
ATCCTGGAGA (
4
)
2.3
0.0023
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
ATCCTGGAGA (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TGCTATTTCT
1.2
0.0012
P8 GC+SHH+1d culture
TGGGGGAGGG
(
2
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
TGGGGGAGGG
(
2
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
TGGGGGAGGG
(
2
)
5.4
0.0054
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
ATCCTGGAGA (
4
)
1.9
0.0019
E12.5 retina
CCTAGAATCC (
2
)
1.9
0.0019
E12.5 retina
TGGGGGAGGG
(
2
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
ATCCTGGAGA (
4
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
TGCTATTTCT
3.6
0.0036
E16.5 retina
ATCCTGGAGA (
4
)
1.8
0.0018
E16.5 retina
CCTAGAATCC (
2
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
TGGGGGAGGG
(
2
)
3.9
0.0039
P0.5 retina
ATCCTGGAGA (
4
)
2
0.002
P0.5 retina
TGCTATTTCT
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
ATCCTGGAGA (
4
)
3.5
0.0035
P2.5 retina
TGGGGGAGGG
(
2
)
3.5
0.0035
P2.5 retina
CCTACAATCC (
4
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
CCTACAATCC (
4
)
2
0.002
P4.5 retina
TGCTATTTCT
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
ATCCTGGAGA (
4
)
1.7
0.0017
P6.5 retina
CCTACAATCC (
4
)
1.7
0.0017
P6.5 retina
TGCTATTTCT
1.7
0.0017
P6.5 retina
TGGGGGAGGG
(
2
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
ATCCTGGAGA (
4
)
1.9
0.0019
P10.5 crx- retina
TGGGGGAGGG
(
2
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
TGGGGGAGGG
(
2
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
CCTAGAATCC (
2
)
1.9
0.0019
Adult retinal
TGCTATTTCT
1.9
0.0019
Adult retinal
TGGGGGAGGG
(
2
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
CCTAGAATCC (
2
)
1.9
0.0019
