Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.330536	Sema6d	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	2		214968
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	SEMA6D[sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAGTCAAA (3) 4.9 0.0049 P8 Cb GC TTAATCAAAA (2) 4.9 0.0049 Cb medulloblastoma TAAAGCAAAA (3) 27.7 0.0277 Cb medulloblastoma TAAAGTCAAA (3) 25.4 0.0254 Cb medulloblastoma TTAATCAAAA (2) 2.3 0.0023 P8 GC+1d culture TAAAGCAAAA (3) 5.7 0.0057 P8 GC+1d culture TAAAGTCAAA (3) 5.7 0.0057 P8 GC+1d culture GGTGGCTCAC (9) 2.3 0.0023 P8 GC+SHH+1d culture TAAAGTCAAA (3) 10.5 0.0105 P8 GC+SHH+1d culture TAAAGCAAAA (3) 9.4 0.0094 P8 GC+SHH+1d culture GGTGGCTCAC (9) 1.2 0.0012 P8 GC+SHH+1d culture TTAATCAAAA (2) 1.2 0.0012 P1 cortex GGTGGCTCAC (9) 13.6 0.0136 P1 cortex TAAAGTCAAA (3) 4.5 0.0045 Hypothalamus TAAAGCAAAA (3) 21.7 0.0217 Hypothalamus TAAAGTCAAA (3) 10.9 0.0109 Hypothalamus GGTGGCTCAC (9) 5.4 0.0054 Hypothalamus TTAATCAAAA (2) 1.8 0.0018 E12.5 retina GGTGGCTCAC (9) 3.8 0.0038 E14.5 retina GCTCCTGAGA 7.3 0.0073 E14.5 retina TAAAGCAAAA (3) 5.5 0.0055 E16.5 retina TTAATCAAAA (2) 5.4 0.0054 E16.5 retina GGTGGCTCAC (9) 1.8 0.0018 E16.5 retina TAAAGTCAAA (3) 1.8 0.0018 E18.5 retina TAAAGCAAAA (3) 21.8 0.0218 E18.5 retina GCTCCTGAGA 5.5 0.0055 E18.5 retina GGTGGCTCAC (9) 3.6 0.0036 E18.5 retina TAAAGTCAAA (3) 1.8 0.0018 E18.5 retina TTAATCAAAA (2) 1.8 0.0018 P0.5 retina GGTGGCTCAC (9) 11.8 0.0118 P0.5 retina TAAAGCAAAA (3) 3.9 0.0039 P2.5 retina TAAAGCAAAA (3) 5.3 0.0053 P2.5 retina TAAAGTCAAA (3) 5.3 0.0053 P2.5 retina GGTGGCTCAC (9) 3.5 0.0035 P2.5 retina TTAATCAAAA (2) 1.8 0.0018 P4.5 retina TAAAGCAAAA (3) 25.8 0.0258 P4.5 retina TTAATCAAAA (2) 5.9 0.0059 P4.5 retina GGTGGCTCAC (9) 4 0.004 P6.5 retina GGTGGCTCAC (9) 5 0.005 P6.5 retina TAAAGCAAAA (3) 5 0.005 P6.5 retina TAAAGTCAAA (3) 5 0.005 P6.5 retina TTAATCAAAA (2) 3.3 0.0033 P6.5 retina GCTCCTGAGA 1.7 0.0017 P10.5 crx- retina GGTGGCTCAC (9) 3.7 0.0037 P10.5 crx- retina TAAAGCAAAA (3) 3.7 0.0037 P10.5 crx- retina TTAATCAAAA (2) 3.7 0.0037 P10.5 crx+ retina TAAAGCAAAA (3) 9.6 0.0096 P10.5 crx+ retina GGTGGCTCAC (9) 7.7 0.0077 P10.5 crx+ retina TTAATCAAAA (2) 3.8 0.0038 P10.5 crx+ retina GCTCCTGAGA 1.9 0.0019 Adult retinal TAAAGCAAAA (3) 31.5 0.0315 Adult retinal GGTGGCTCAC (9) 7.4 0.0074 Adult retinal TTAATCAAAA (2) 1.9 0.0019 ONL TAAAGCAAAA (3) 26.8 0.0268 ONL GGTGGCTCAC (9) 5.7 0.0057 ONL GCTCCTGAGA 1.9 0.0019