Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.330538	Slc24a5	solute carrier family 24, member 5	2		317750
Mm.330538	Myef2	myelin basic protein expression factor 2, repressor	2	2 73.0 cM	17876
Human Homolog	MYEF2[myelin expression factor 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGTTAAAAT (4) 9.8 0.0098 P8 Cb GC AAAAATAAAA (20) 8.2 0.0082 P8 Cb GC GTTGGAACCT (8) 4.9 0.0049 P8 Cb GC TCTTCATTTA (3) 1.6 0.0016 Cb medulloblastoma AAAAATAAAA (20) 20.8 0.0208 Cb medulloblastoma GAGACCAAGG (3) 2.3 0.0023 Cb medulloblastoma TTGTTAAAAT (4) 2.3 0.0023 P8 GC+1d culture AAAAATAAAA (20) 11.4 0.0114 P8 GC+1d culture TTGTTAAAAT (4) 5.7 0.0057 P8 GC+1d culture GTTGGAACCT (8) 3.4 0.0034 P8 GC+1d culture GAGACCAAGG (3) 2.3 0.0023 P8 GC+1d culture TCTTCATTTA (3) 2.3 0.0023 P8 GC+1d culture AATTTTCTTC (4) 1.1 0.0011 P8 GC+1d culture TGTGTGTGTC (6) 1.1 0.0011 P8 GC+SHH+1d culture AAAAATAAAA (20) 5.9 0.0059 P8 GC+SHH+1d culture TTGTTAAAAT (4) 4.7 0.0047 P8 GC+SHH+1d culture GTTGGAACCT (8) 3.5 0.0035 P8 GC+SHH+1d culture AATTTTCTTC (4) 1.2 0.0012 P8 GC+SHH+1d culture TCTTCATTTA (3) 1.2 0.0012 3T3 fibroblasts GTTGGAACCT (8) 3.5 0.0035 3T3 fibroblasts TCTTCATTTA (3) 3.5 0.0035 E15 cortex AATTTTCTTC (4) 4.9 0.0049 P1 cortex TCTTCATTTA (3) 27.3 0.0273 P1 cortex AAAAATAAAA (20) 4.5 0.0045 P1 cortex TGTGTGTGTC (6) 4.5 0.0045 Hypothalamus AAAAATAAAA (20) 14.5 0.0145 Hypothalamus AATGAGCTTG (2) 1.8 0.0018 Hypothalamus AATTTTCTTC (4) 1.8 0.0018 E12.5 retina GTTGGAACCT (8) 3.8 0.0038 E12.5 retina TTGTTAAAAT (4) 3.8 0.0038 E12.5 retina AAAAATAAAA (20) 1.9 0.0019 E12.5 retina GAGACCAAGG (3) 1.9 0.0019 E12.5 retina TCTTCATTTA (3) 1.9 0.0019 E14.5 retina AAAAATAAAA (20) 16.4 0.0164 E14.5 retina TCTTCATTTA (3) 3.6 0.0036 E14.5 retina TTGTTAAAAT (4) 3.6 0.0036 E14.5 retina GTTGGAACCT (8) 1.8 0.0018 E16.5 retina AAAAATAAAA (20) 9.1 0.0091 E16.5 retina TTGTTAAAAT (4) 3.6 0.0036 E18.5 retina AAAAATAAAA (20) 7.3 0.0073 E18.5 retina TTGTTAAAAT (4) 5.5 0.0055 E18.5 retina AATGAGCTTG (2) 1.8 0.0018 E18.5 retina GTTGGAACCT (8) 1.8 0.0018 P0.5 retina GAGACCAAGG (3) 5.9 0.0059 P0.5 retina AAAAATAAAA (20) 3.9 0.0039 P0.5 retina TTGTTAAAAT (4) 3.9 0.0039 P0.5 retina GTTGGAACCT (8) 2 0.002 P0.5 retina TCTTCATTTA (3) 2 0.002 P0.5 retina TGTGTGTGTC (6) 2 0.002 P2.5 retina TCTTCATTTA (3) 5.3 0.0053 P2.5 retina TTGTTAAAAT (4) 5.3 0.0053 P2.5 retina AAAAATAAAA (20) 1.8 0.0018 P2.5 retina AATGAGCTTG (2) 1.8 0.0018 P4.5 retina GTTGGAACCT (8) 7.9 0.0079 P4.5 retina AAAAATAAAA (20) 5.9 0.0059 P4.5 retina TCTTCATTTA (3) 5.9 0.0059 P4.5 retina TGTGTGTGTC (6) 2 0.002 P4.5 retina TTGTTAAAAT (4) 2 0.002 P6.5 retina AAAAATAAAA (20) 13.3 0.0133 P6.5 retina GCTATATCTA (2) 3.3 0.0033 P6.5 retina AATGAGCTTG (2) 1.7 0.0017 P6.5 retina GTTGGAACCT (8) 1.7 0.0017 P10.5 crx- retina AATGAGCTTG (2) 3.7 0.0037 P10.5 crx- retina AAAAATAAAA (20) 1.9 0.0019 P10.5 crx- retina GCTATATCTA (2) 1.9 0.0019 P10.5 crx- retina TTGTTAAAAT (4) 1.9 0.0019 P10.5 crx+ retina AAAAATAAAA (20) 3.8 0.0038 P10.5 crx+ retina GTTGGAACCT (8) 3.8 0.0038 P10.5 crx+ retina TCTTCATTTA (3) 1.9 0.0019 P10.5 crx+ retina TGTGTGTGTC (6) 1.9 0.0019 Adult retinal TTGTTAAAAT (4) 3.7 0.0037 Adult retinal AAAAATAAAA (20) 1.9 0.0019 Adult retinal GAGACCAAGG (3) 1.9 0.0019 Adult retinal GTTGGAACCT (8) 1.9 0.0019 ONL AATTTTCTTC (4) 1.9 0.0019 ONL GAGACCAAGG (3) 1.9 0.0019 ONL GTTGGAACCT (8) 1.9 0.0019 ONL TCTTCATTTA (3) 1.9 0.0019 ONL TTGTTAAAAT (4) 1.9 0.0019