Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.330607	9630028H03Rik	RIKEN cDNA 9630028H03 gene	2		320684
Mm.330607	Plcb1	phospholipase C, beta 1	2	2 76.7 cM	18795
Gene Ontology	cytoplasm | hydrolase activity | intracellular signaling cascade | lipid catabolism | lipid metabolism | nucleus | phosphoinositide phospholipase C activity | phospholipase C activity | regulation of cell cycle | signal transducer activity | signal transduction
Human Homolog	PLCB1[phospholipase C, beta 1 (phosphoinositide-specific)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 101 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC GCTTTGTTTT (4) 44 0.044 P8 Cb GC ATGTTTCTTC (4) 3.3 0.0033 P8 Cb GC ACTAGCTTGG (4) 1.6 0.0016 P8 Cb GC ATGAGAATTT (3) 1.6 0.0016 P8 Cb GC CACAGCTGCT (5) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma GCTTTGTTTT (4) 16.2 0.0162 Cb medulloblastoma ATGTTTCTTC (4) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture GCTTTGTTTT (4) 28.5 0.0285 P8 GC+1d culture ATGTTTCTTC (4) 4.6 0.0046 P8 GC+1d culture ACTAGCTTGG (4) 1.1 0.0011 P8 GC+1d culture CACAGCTGCT (5) 1.1 0.0011 P8 GC+1d culture GCCACAGAAG (5) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture GCTTTGTTTT (4) 46.8 0.0468 P8 GC+SHH+1d culture ATGAGAATTT (3) 3.5 0.0035 P8 GC+SHH+1d culture ATGTTTCTTC (4) 1.2 0.0012 P8 GC+SHH+1d culture CACAGCTGCT (5) 1.2 0.0012 P8 GC+SHH+1d culture GCCACAGAAG (5) 1.2 0.0012 P8 GC+SHH+1d culture GGCAGACTGA (3) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GCTTTGTTTT (4) 7 0.007 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex GCTTTGTTTT (4) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex ATGAGAATTT (3) 9.1 0.0091 P1 cortex GCTTTGTTTT (4) 9.1 0.0091 P1 cortex ACTAGCTTGG (4) 4.5 0.0045 P1 cortex GACAGAGAAG (5) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus GCCACAGAAG (5) 3.6 0.0036 Hypothalamus GCTTTGTTTT (4) 3.6 0.0036 Hypothalamus ATGTTTCTTC (4) 1.8 0.0018 Hypothalamus CACAGCTGCT (5) 1.8 0.0018 Hypothalamus GGCAGACTGA (3) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina GCTTTGTTTT (4) 24.4 0.0244 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina ATGTTTCTTC (4) 1.9 0.0019 E12.5 retina CACAGCTGCT (5) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina GCTTTGTTTT (4) 9.1 0.0091 E14.5 retina ACTAGCTTGG (4) 1.8 0.0018 E14.5 retina ATGAGAATTT (3) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina GCTTTGTTTT (4) 19.9 0.0199 E16.5 retina ATGAGAATTT (3) 5.4 0.0054 E16.5 retina CACAGCTGCT (5) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina GCTTTGTTTT (4) 16.4 0.0164 E18.5 retina CACAGCTGCT (5) 1.8 0.0018 E18.5 retina GACAGAGAAG (5) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina GCTTTGTTTT (4) 9.8 0.0098 P0.5 retina ACTAGCTTGG (4) 3.9 0.0039 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina GCTTTGTTTT (4) 17.6 0.0176 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina GCTTTGTTTT (4) 9.9 0.0099 P4.5 retina GGCAGACTGA (3) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina GCTTTGTTTT (4) 13.3 0.0133 P6.5 retina ACTAGCTTGG (4) 3.3 0.0033 P6.5 retina ATGAGAATTT (3) 3.3 0.0033 P6.5 retina GACAGAGAAG (5) 1.7 0.0017 P6.5 retina GGCAGACTGA (3) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GCTTTGTTTT (4) 9.3 0.0093 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina ACTAGCTTGG (4) 1.9 0.0019 P10.5 crx- retina ATGAGAATTT (3) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina GCTTTGTTTT (4) 13.5 0.0135 P10.5 crx+ retina ATGAGAATTT (3) 5.8 0.0058 P10.5 crx+ retina ACTAGCTTGG (4) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal ATGAGAATTT (3) 3.7 0.0037 Adult retinal GCTTTGTTTT (4) 3.7 0.0037 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL ATGAGAATTT (3) 11.5 0.0115 ONL GCTTTGTTTT (4) 5.7 0.0057