Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.330731	Tgm2	transglutaminase 2, C polypeptide	2	2 89.0 cM	21817
Gene Ontology	acyltransferase activity | calcium ion binding | cysteine-type endopeptidase activity | peptide cross-linking | protein-glutamine gamma-glutamyltransferase activity | proteolysis and peptidolysis | transferase activity
Human Homolog	TGM2[transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 98 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGAAGGAGAC (4) 13.1 0.0131 P8 Cb GC CAAATAAAAA (6) 4.9 0.0049 P8 Cb GC GCCAATGGCC (3) 3.3 0.0033 P8 Cb GC TCCTCTCGCT (3) 3.3 0.0033 P8 Cb GC CTGCTCTACA (4) 1.6 0.0016 P8 Cb GC TGAACACTGA (3) 1.6 0.0016 P8 Cb GC TGAACCCTGA 1.6 0.0016 P8 Cb GC TGCAACACTG (5) 1.6 0.0016 Cb medulloblastoma CAAATAAAAA (6) 6.9 0.0069 Cb medulloblastoma TGAACACTGA (3) 4.6 0.0046 Cb medulloblastoma CTGCTCTACA (4) 2.3 0.0023 Cb medulloblastoma GCTGCCTGGG (2) 2.3 0.0023 Cb medulloblastoma GGAAGGAGAC (4) 2.3 0.0023 Cb medulloblastoma TGAACCCTGA 2.3 0.0023 Cb medulloblastoma TGCAACACTG (5) 2.3 0.0023 P8 GC+1d culture TGAACACTGA (3) 3.4 0.0034 P8 GC+1d culture CAACCAAGGG (2) 2.3 0.0023 P8 GC+1d culture ATAAGAAGAG (3) 1.1 0.0011 P8 GC+1d culture CAAATAAAAA (6) 1.1 0.0011 P8 GC+1d culture CTGCTCTACA (4) 1.1 0.0011 P8 GC+1d culture GCCAATGGCC (3) 1.1 0.0011 P8 GC+1d culture GCTGCCTGGG (2) 1.1 0.0011 P8 GC+1d culture GGAAGGAGAC (4) 1.1 0.0011 P8 GC+1d culture TGAACCCTGA 1.1 0.0011 P8 GC+1d culture TGCAACACTG (5) 1.1 0.0011 P8 GC+1d culture TGGCGGAGGC (2) 1.1 0.0011 P8 GC+SHH+1d culture TGAACACTGA (3) 5.9 0.0059 P8 GC+SHH+1d culture CAAATAAAAA (6) 4.7 0.0047 P8 GC+SHH+1d culture CAACCAAGGG (2) 1.2 0.0012 P8 GC+SHH+1d culture CTGCTCTACA (4) 1.2 0.0012 P8 GC+SHH+1d culture GGAAGGAGAC (4) 1.2 0.0012 3T3 fibroblasts ATAAGAAGAG (3) 7 0.007 3T3 fibroblasts GCCAATGGCC (3) 3.5 0.0035 3T3 fibroblasts TGGCGGAGGC (2) 3.5 0.0035 E15 cortex GCTGCCTGGG (2) 14.8 0.0148 E15 cortex CAAATAAAAA (6) 4.9 0.0049 E15 cortex GCCAATGGCC (3) 4.9 0.0049 E15 cortex TGCAACACTG (5) 4.9 0.0049 P1 cortex CAAATAAAAA (6) 4.5 0.0045 P1 cortex CTGCTCTACA (4) 4.5 0.0045 P1 cortex GCCAATGGCC (3) 4.5 0.0045 Hypothalamus CAAATAAAAA (6) 3.6 0.0036 Hypothalamus CTGCTCTACA (4) 3.6 0.0036 Hypothalamus GCCAATGGCC (3) 3.6 0.0036 Hypothalamus GCCTGGATGG 3.6 0.0036 Hypothalamus CAACCAAGGG (2) 1.8 0.0018 E12.5 retina CAAATAAAAA (6) 11.3 0.0113 E12.5 retina ATAAGAAGAG (3) 3.8 0.0038 E12.5 retina CTGCTCTACA (4) 1.9 0.0019 E12.5 retina TCCTCTCGCT (3) 1.9 0.0019 E14.5 retina CAAATAAAAA (6) 3.6 0.0036 E14.5 retina CTGCTCTACA (4) 3.6 0.0036 E14.5 retina ATAAGAAGAG (3) 1.8 0.0018 E14.5 retina CCTGGTGCCC (10) 1.8 0.0018 E14.5 retina GCCTGGATGG 1.8 0.0018 E14.5 retina TGAACACTGA (3) 1.8 0.0018 E14.5 retina TGCAACACTG (5) 1.8 0.0018 E16.5 retina CAAATAAAAA (6) 3.6 0.0036 E16.5 retina GGAAGGAGAC (4) 3.6 0.0036 E16.5 retina TGGCGGAGGC (2) 3.6 0.0036 E16.5 retina CTGCTCTACA (4) 1.8 0.0018 E16.5 retina GCCTGGATGG 1.8 0.0018 E16.5 retina TGCAACACTG (5) 1.8 0.0018 E18.5 retina CAAATAAAAA (6) 10.9 0.0109 E18.5 retina TGAACACTGA (3) 9.1 0.0091 P0.5 retina TGAACACTGA (3) 5.9 0.0059 P0.5 retina ATAAGAAGAG (3) 2 0.002 P0.5 retina CAAATAAAAA (6) 2 0.002 P0.5 retina CCTGGTGCCC (10) 2 0.002 P0.5 retina CTGCTCTACA (4) 2 0.002 P0.5 retina GGAAGGAGAC (4) 2 0.002 P2.5 retina GGAAGGAGAC (4) 5.3 0.0053 P2.5 retina TGAACACTGA (3) 3.5 0.0035 P2.5 retina CAAATAAAAA (6) 1.8 0.0018 P4.5 retina GGAAGGAGAC (4) 9.9 0.0099 P4.5 retina CAAATAAAAA (6) 5.9 0.0059 P4.5 retina TGAACACTGA (3) 5.9 0.0059 P6.5 retina CAAATAAAAA (6) 10 0.01 P6.5 retina CTGCTCTACA (4) 10 0.01 P6.5 retina GGAAGGAGAC (4) 5 0.005 P6.5 retina CAACCAAGGG (2) 1.7 0.0017 P6.5 retina TGAACACTGA (3) 1.7 0.0017 P6.5 retina TGCAACACTG (5) 1.7 0.0017 P10.5 crx- retina TGAACACTGA (3) 5.6 0.0056 P10.5 crx- retina CAACCAAGGG (2) 3.7 0.0037 P10.5 crx- retina CTGCTCTACA (4) 3.7 0.0037 P10.5 crx- retina CCTGGTGCCC (10) 1.9 0.0019 P10.5 crx- retina GGAAGGAGAC (4) 1.9 0.0019 P10.5 crx- retina TCCTCTCGCT (3) 1.9 0.0019 P10.5 crx+ retina CTGCTCTACA (4) 7.7 0.0077 P10.5 crx+ retina ATAAGAAGAG (3) 1.9 0.0019 P10.5 crx+ retina CAAATAAAAA (6) 1.9 0.0019 P10.5 crx+ retina TGAACACTGA (3) 1.9 0.0019 Adult retinal CTGCTCTACA (4) 5.6 0.0056 Adult retinal CAAATAAAAA (6) 1.9 0.0019 ONL CAAATAAAAA (6) 1.9 0.0019 ONL CAACCAAGGG (2) 1.9 0.0019 ONL CTGCTCTACA (4) 1.9 0.0019