Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.331007	Ndufc1	NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1	3		66377
Gene Ontology	integral to membrane | mitochondrion | oxidoreductase activity
Human Homolog	NDUFC1[NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 93 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAAAAAAAA (81) 27.7 0.0277 P8 Cb GC TGTAGACGGA (3) 14.7 0.0147 P8 Cb GC GTTAAGTTAA 13.1 0.0131 P8 Cb GC TGCAAAAAAA (21) 4.9 0.0049 P8 Cb GC TGTAAAAAAA (12) 4.9 0.0049 Cb medulloblastoma TGAAAAAAAA (81) 78.6 0.0786 Cb medulloblastoma GTTAAGTTAA 16.2 0.0162 Cb medulloblastoma TGTAGACGGA (3) 16.2 0.0162 Cb medulloblastoma TGCAAAAAAA (21) 13.9 0.0139 Cb medulloblastoma TGTAAAAAAA (12) 9.2 0.0092 P8 GC+1d culture TGAAAAAAAA (81) 26.3 0.0263 P8 GC+1d culture TGTAGACGGA (3) 12.6 0.0126 P8 GC+1d culture TGCAAAAAAA (21) 9.1 0.0091 P8 GC+1d culture GTTAAGTTAA 8 0.008 P8 GC+1d culture TGTAAAAAAA (12) 5.7 0.0057 P8 GC+SHH+1d culture TGAAAAAAAA (81) 57.4 0.0574 P8 GC+SHH+1d culture TGTAGACGGA (3) 16.4 0.0164 P8 GC+SHH+1d culture TGCAAAAAAA (21) 15.2 0.0152 P8 GC+SHH+1d culture TGTAAAAAAA (12) 11.7 0.0117 P8 GC+SHH+1d culture GTTAAGTTAA 10.5 0.0105 3T3 fibroblasts TGAAAAAAAA (81) 7 0.007 3T3 fibroblasts TGTAGACGGA (3) 3.5 0.0035 E15 cortex TGAAAAAAAA (81) 29.7 0.0297 E15 cortex TGTAGACGGA (3) 14.8 0.0148 E15 cortex GTTAAGTTAA 9.9 0.0099 E15 cortex TGTAAAAAAA (12) 4.9 0.0049 P1 cortex GTTAAGTTAA 13.6 0.0136 P1 cortex TGAAAAAAAA (81) 4.5 0.0045 P1 cortex TGTAAAAAAA (12) 4.5 0.0045 P1 cortex TGTAGACGGA (3) 4.5 0.0045 Hypothalamus TGAAAAAAAA (81) 36.2 0.0362 Hypothalamus TGTAGACGGA (3) 36.2 0.0362 Hypothalamus GTTAAGTTAA 23.5 0.0235 Hypothalamus TGCAAAAAAA (21) 9.1 0.0091 Hypothalamus TGTAAAAAAA (12) 5.4 0.0054 E12.5 retina TGAAAAAAAA (81) 31.9 0.0319 E12.5 retina TGTAGACGGA (3) 20.7 0.0207 E12.5 retina GTTAAGTTAA 11.3 0.0113 E12.5 retina TGTAAAAAAA (12) 3.8 0.0038 E12.5 retina TGCAAAAAAA (21) 1.9 0.0019 E14.5 retina TGAAAAAAAA (81) 49.2 0.0492 E14.5 retina TGTAGACGGA (3) 16.4 0.0164 E14.5 retina GTTAAGTTAA 12.8 0.0128 E14.5 retina TGTAAAAAAA (12) 5.5 0.0055 E14.5 retina TGCAAAAAAA (21) 1.8 0.0018 E16.5 retina TGTAGACGGA (3) 21.7 0.0217 E16.5 retina TGAAAAAAAA (81) 16.3 0.0163 E16.5 retina GTTAAGTTAA 7.2 0.0072 E16.5 retina TGCAAAAAAA (21) 5.4 0.0054 E16.5 retina TGTAAAAAAA (12) 1.8 0.0018 E18.5 retina TGAAAAAAAA (81) 74.6 0.0746 E18.5 retina TGTAGACGGA (3) 45.5 0.0455 E18.5 retina GTTAAGTTAA 29.1 0.0291 E18.5 retina TGCAAAAAAA (21) 20 0.02 E18.5 retina TGTAAAAAAA (12) 14.6 0.0146 P0.5 retina TGTAGACGGA (3) 23.6 0.0236 P0.5 retina TGAAAAAAAA (81) 15.7 0.0157 P0.5 retina TGCAAAAAAA (21) 7.9 0.0079 P0.5 retina GTTAAGTTAA 5.9 0.0059 P0.5 retina TGTAAAAAAA (12) 3.9 0.0039 P2.5 retina TGAAAAAAAA (81) 42.2 0.0422 P2.5 retina TGTAGACGGA (3) 24.6 0.0246 P2.5 retina GTTAAGTTAA 12.3 0.0123 P2.5 retina TGCAAAAAAA (21) 3.5 0.0035 P2.5 retina TGTAAAAAAA (12) 3.5 0.0035 P4.5 retina TGAAAAAAAA (81) 43.6 0.0436 P4.5 retina TGTAGACGGA (3) 29.7 0.0297 P4.5 retina GTTAAGTTAA 19.8 0.0198 P4.5 retina TGTAAAAAAA (12) 11.9 0.0119 P4.5 retina TGCAAAAAAA (21) 4 0.004 P6.5 retina TGTAGACGGA (3) 35 0.035 P6.5 retina TGAAAAAAAA (81) 33.3 0.0333 P6.5 retina GTTAAGTTAA 13.3 0.0133 P6.5 retina TGCAAAAAAA (21) 5 0.005 P6.5 retina TGTAAAAAAA (12) 5 0.005 P10.5 crx- retina GTTAAGTTAA 14.9 0.0149 P10.5 crx- retina TGTAGACGGA (3) 11.1 0.0111 P10.5 crx- retina TGAAAAAAAA (81) 9.3 0.0093 P10.5 crx+ retina TGTAGACGGA (3) 40.4 0.0404 P10.5 crx+ retina GTTAAGTTAA 19.2 0.0192 P10.5 crx+ retina TGAAAAAAAA (81) 19.2 0.0192 P10.5 crx+ retina TGCAAAAAAA (21) 9.6 0.0096 P10.5 crx+ retina TGTAAAAAAA (12) 7.7 0.0077 Adult retinal TGTAGACGGA (3) 20.4 0.0204 Adult retinal TGAAAAAAAA (81) 13 0.013 Adult retinal TGCAAAAAAA (21) 5.6 0.0056 Adult retinal GTTAAGTTAA 3.7 0.0037 Adult retinal TGTAAAAAAA (12) 3.7 0.0037 ONL TGAAAAAAAA (81) 19.2 0.0192 ONL GTTAAGTTAA 11.5 0.0115 ONL TGTAGACGGA (3) 11.5 0.0115 ONL TGCAAAAAAA (21) 7.7 0.0077 ONL TGTAAAAAAA (12) 5.7 0.0057