Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.331089	Pdgfc	platelet-derived growth factor, C polypeptide	3		54635
Gene Ontology	cell proliferation | extracellular | extracellular space | growth factor activity | platelet-derived growth factor receptor binding | positive regulation of cell proliferation | regulation of cell cycle | regulation of peptidyl-tyrosine phosphorylation | transmembrane receptor protein tyrosine kinase activation (dimerization)
Human Homolog	PDGFC[platelet derived growth factor C]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 35 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCAACCAAG (2) 4.9 0.0049 P8 Cb GC GATATTTTTA (3) 3.3 0.0033 Cb medulloblastoma GCCAACCAAG (2) 13.9 0.0139 Cb medulloblastoma CTGAAAGGAA (4) 2.3 0.0023 P8 GC+1d culture GCCAACCAAG (2) 14.8 0.0148 P8 GC+1d culture CTGAAAGGAA (4) 4.6 0.0046 P8 GC+1d culture GATATTTTTA (3) 1.1 0.0011 P8 GC+SHH+1d culture GCCAACCAAG (2) 10.5 0.0105 3T3 fibroblasts GATATTTTTA (3) 3.5 0.0035 3T3 fibroblasts GCCAACCAAG (2) 3.5 0.0035 E15 cortex GCCAACCAAG (2) 9.9 0.0099 P1 cortex GCCAACCAAG (2) 18.2 0.0182 Hypothalamus GCCAACCAAG (2) 5.4 0.0054 E12.5 retina GCCAACCAAG (2) 15 0.015 E12.5 retina CTGAAAGGAA (4) 1.9 0.0019 E12.5 retina GATATTTTTA (3) 1.9 0.0019 E14.5 retina GCCAACCAAG (2) 9.1 0.0091 E14.5 retina AAACTCTGGC (3) 3.6 0.0036 E16.5 retina GCCAACCAAG (2) 16.3 0.0163 E16.5 retina CTGAAAGGAA (4) 1.8 0.0018 E18.5 retina GCCAACCAAG (2) 3.6 0.0036 P0.5 retina GCCAACCAAG (2) 27.5 0.0275 P0.5 retina CTGAAAGGAA (4) 3.9 0.0039 P2.5 retina GCCAACCAAG (2) 8.8 0.0088 P4.5 retina GCCAACCAAG (2) 7.9 0.0079 P4.5 retina GATATTTTTA (3) 2 0.002 P6.5 retina GCCAACCAAG (2) 11.7 0.0117 P10.5 crx- retina GCCAACCAAG (2) 13 0.013 P10.5 crx+ retina GCCAACCAAG (2) 13.5 0.0135 P10.5 crx+ retina ACACTGGCTC (5) 1.9 0.0019 Adult retinal GCCAACCAAG (2) 11.1 0.0111 Adult retinal ACACTGGCTC (5) 1.9 0.0019 ONL GCCAACCAAG (2) 26.8 0.0268 ONL AAACTCTGGC (3) 1.9 0.0019 ONL ACACTGGCTC (5) 1.9 0.0019