Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.331547	Aco1	aconitase 1	4	4 20.9 cM	11428
Gene Ontology	aconitate hydratase activity | cytoplasm | hydro-lyase activity | iron ion binding | iron ion homeostasis | iron-responsive element binding | lyase activity | metabolism | regulation of translation | RNA binding | tricarboxylic acid cycle
Human Homolog	ACO1[aconitase 1, soluble]

No In Situ Hybridization images could be found.



SAGE Tags

Total 94 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC ATCCGAAAGA (4) 71.8 0.0718 P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma ATCCGAAAGA (4) 9.2 0.0092 Cb medulloblastoma AAACAAAAAA (12) 2.3 0.0023 Cb medulloblastoma AAGCAAAAAA (14) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture ATCCGAAAGA (4) 79.9 0.0799 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture AAGCAAAAAA (14) 2.3 0.0023 P8 GC+1d culture ACCCGAAAGA (2) 2.3 0.0023 P8 GC+1d culture GTGCTTCCCA (2) 2.3 0.0023 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture ATCCGAAAGA (4) 83.1 0.0831 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture GTGCTTCCCA (2) 3.5 0.0035 P8 GC+SHH+1d culture AAAAAACAAA (15) 2.3 0.0023 P8 GC+SHH+1d culture ACAACACTGC (4) 1.2 0.0012 3T3 fibroblasts ATCCGAAAGA (4) 94.6 0.0946 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex ATCCGAAAGA (4) 64.3 0.0643 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex ACAACACTGC (4) 4.9 0.0049 E15 cortex GTGCTTCCCA (2) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex ATCCGAAAGA (4) 77.3 0.0773 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex ACCCGAAAGA (2) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus ATCCGAAAGA (4) 36.2 0.0362 Hypothalamus GCCCGGGGAA (4) 3.6 0.0036 Hypothalamus AAACAAAAAA (12) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina ATCCGAAAGA (4) 103.3 0.1033 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina GCCCGGGGAA (4) 3.8 0.0038 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina ATCCGAAAGA (4) 47.4 0.0474 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina AAACAAAAAA (12) 1.8 0.0018 E14.5 retina AAGCAAAAAA (14) 1.8 0.0018 E14.5 retina GCCCGGGGAA (4) 1.8 0.0018 E16.5 retina ATCCGAAAGA (4) 58 0.058 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina GCCCGGGGAA (4) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina ATCCGAAAGA (4) 32.7 0.0327 E18.5 retina AAGCAAAAAA (14) 5.5 0.0055 E18.5 retina AAACAAAAAA (12) 3.6 0.0036 E18.5 retina AAAAAACAAA (15) 1.8 0.0018 E18.5 retina GCCCGGGGAA (4) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina ATCCGAAAGA (4) 60.8 0.0608 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina GTGCTTCCCA (2) 3.9 0.0039 P0.5 retina GCCCGGGGAA (4) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina ATCCGAAAGA (4) 45.8 0.0458 P2.5 retina GCCCGGGGAA (4) 5.3 0.0053 P2.5 retina AAGCAAAAAA (14) 3.5 0.0035 P2.5 retina AAACAAAAAA (12) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina ATCCGAAAGA (4) 37.6 0.0376 P4.5 retina AAACAAAAAA (12) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina ATCCGAAAGA (4) 30 0.03 P6.5 retina AAAAAACAAA (15) 1.7 0.0017 P6.5 retina ACAACACTGC (4) 1.7 0.0017 P6.5 retina GCCCGGGGAA (4) 1.7 0.0017 P6.5 retina GTGCTTCCCA (2) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina ATCCGAAAGA (4) 42.7 0.0427 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina GCCCGGGGAA (4) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina ATCCGAAAGA (4) 23.1 0.0231 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal ATCCGAAAGA (4) 24.1 0.0241 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL ATCCGAAAGA (4) 26.8 0.0268 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL AAAAAACAAA (15) 1.9 0.0019 ONL GTGCTTCCCA (2) 1.9 0.0019