Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.331640	Rod1	ROD1 regulator of differentiation 1 (S. pombe)	4		230257
Mm.331640	1700018M17Rik	RIKEN cDNA 1700018M17 gene	4		72245
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 88 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTTTTTTTC (20) 3.3 0.0033 P8 Cb GC GGATCATTTA (4) 3.3 0.0033 P8 Cb GC TTTTAAATTT (9) 3.3 0.0033 P8 Cb GC ACTATGATTG (6) 1.6 0.0016 P8 Cb GC GCATCTGTAC (3) 1.6 0.0016 P8 Cb GC GGATCTTTTA (5) 1.6 0.0016 P8 Cb GC GTTTAAATTT (9) 1.6 0.0016 P8 Cb GC TTAATTTTTT (6) 1.6 0.0016 Cb medulloblastoma ATTTTTTTTC (20) 9.2 0.0092 Cb medulloblastoma ACCTTGGAAG (12) 2.3 0.0023 Cb medulloblastoma GCATCTGTAA (8) 2.3 0.0023 Cb medulloblastoma GCATCTGTAC (3) 2.3 0.0023 Cb medulloblastoma TTAATTTTTT (6) 2.3 0.0023 P8 GC+1d culture TTAATTTTTT (6) 9.1 0.0091 P8 GC+1d culture ACTATGATTG (6) 3.4 0.0034 P8 GC+1d culture ATTTTTTTTC (20) 3.4 0.0034 P8 GC+1d culture TTTGAAGCCA (4) 3.4 0.0034 P8 GC+1d culture GCATCTGTAC (3) 2.3 0.0023 P8 GC+1d culture TTTTAAATTT (9) 2.3 0.0023 P8 GC+1d culture ACCTTGGAAG (12) 1.1 0.0011 P8 GC+1d culture GTTTAAATTT (9) 1.1 0.0011 P8 GC+1d culture TAAAACATTA (3) 1.1 0.0011 P8 GC+SHH+1d culture ATTTTTTTTC (20) 4.7 0.0047 P8 GC+SHH+1d culture TTAATTTTTT (6) 3.5 0.0035 P8 GC+SHH+1d culture ACCTTGGAAG (12) 2.3 0.0023 P8 GC+SHH+1d culture GCATCTGTAA (8) 2.3 0.0023 P8 GC+SHH+1d culture GAAAAAAACA (9) 1.2 0.0012 P8 GC+SHH+1d culture GCATCTGTAC (3) 1.2 0.0012 P8 GC+SHH+1d culture GGATCATTTA (4) 1.2 0.0012 P8 GC+SHH+1d culture TTTGAAGCCA (4) 1.2 0.0012 3T3 fibroblasts CTGCTGCTTT (5) 3.5 0.0035 E15 cortex ATTTTTTTTC (20) 4.9 0.0049 E15 cortex TTTTAAATTT (9) 4.9 0.0049 P1 cortex ATTTTTTTTC (20) 40.9 0.0409 P1 cortex GCATCTGTAC (3) 4.5 0.0045 Hypothalamus ATTTTTTTTC (20) 1.8 0.0018 Hypothalamus GCATCTGTAA (8) 1.8 0.0018 Hypothalamus TTAATTTTTT (6) 1.8 0.0018 E12.5 retina ATTTTTTTTC (20) 9.4 0.0094 E12.5 retina TTTTAAATTT (9) 3.8 0.0038 E12.5 retina GGATCTTTTA (5) 1.9 0.0019 E12.5 retina TTAATTTTTT (6) 1.9 0.0019 E12.5 retina TTTGAAGCCA (4) 1.9 0.0019 E14.5 retina ATTTTTTTTC (20) 5.5 0.0055 E14.5 retina TTTTAAATTT (9) 5.5 0.0055 E14.5 retina TAAAACATTA (3) 3.6 0.0036 E14.5 retina TTAATTTTTT (6) 3.6 0.0036 E14.5 retina GAAAAAAACA (9) 1.8 0.0018 E14.5 retina GCATCTGTAA (8) 1.8 0.0018 E14.5 retina GCATCTGTAC (3) 1.8 0.0018 E14.5 retina GGTCTGTCCA (9) 1.8 0.0018 E14.5 retina GTTTAAATTT (9) 1.8 0.0018 E16.5 retina ATTTTTTTTC (20) 9.1 0.0091 E16.5 retina GCATCTGTAC (3) 1.8 0.0018 E16.5 retina GGATCATTTA (4) 1.8 0.0018 E18.5 retina ATTTTTTTTC (20) 7.3 0.0073 E18.5 retina TTAATTTTTT (6) 7.3 0.0073 E18.5 retina CTGCTGCTTT (5) 1.8 0.0018 E18.5 retina GAAAAAAACA (9) 1.8 0.0018 E18.5 retina GCATCTGTAA (8) 1.8 0.0018 E18.5 retina GCATCTGTAC (3) 1.8 0.0018 P0.5 retina ATTTTTTTTC (20) 3.9 0.0039 P0.5 retina ACCTTGGAAG (12) 2 0.002 P2.5 retina ATTTTTTTTC (20) 8.8 0.0088 P2.5 retina GCATCTGTAC (3) 1.8 0.0018 P2.5 retina TTAATTTTTT (6) 1.8 0.0018 P2.5 retina TTTTAAATTT (9) 1.8 0.0018 P4.5 retina TTAATTTTTT (6) 7.9 0.0079 P4.5 retina ATTTTTTTTC (20) 2 0.002 P6.5 retina ATTTTTTTTC (20) 6.7 0.0067 P6.5 retina ACCTTGGAAG (12) 3.3 0.0033 P6.5 retina GCATCTGTAC (3) 1.7 0.0017 P6.5 retina TTAATTTTTT (6) 1.7 0.0017 P10.5 crx- retina ACCTTGGAAG (12) 5.6 0.0056 P10.5 crx- retina GCATCTGTAC (3) 1.9 0.0019 P10.5 crx- retina TTTTAAATTT (9) 1.9 0.0019 P10.5 crx+ retina ACCTTGGAAG (12) 5.8 0.0058 P10.5 crx+ retina ATTTTTTTTC (20) 3.8 0.0038 P10.5 crx+ retina CTGCTGCTTT (5) 1.9 0.0019 P10.5 crx+ retina GCATCTGTAC (3) 1.9 0.0019 P10.5 crx+ retina GGATCTTTTA (5) 1.9 0.0019 P10.5 crx+ retina TTAATTTTTT (6) 1.9 0.0019 Adult retinal ACCTTGGAAG (12) 3.7 0.0037 Adult retinal ATTTTTTTTC (20) 1.9 0.0019 ONL GGTCTGTCCA (9) 3.8 0.0038 ONL ATTTTTTTTC (20) 1.9 0.0019 ONL CTGCTGCTTT (5) 1.9 0.0019 ONL TTTTAAATTT (9) 1.9 0.0019