Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.332020
Prdm2
PR domain containing 2, with ZNF domain
4
4 74.0 cM
110593
Gene Ontology
nucleic acid binding
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 45 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGAGCTGCA (
4
)
11.4
0.0114
P8 Cb GC
CTACAAAAGG
3.3
0.0033
P8 Cb GC
TTATTTAAAA
(
5
)
1.6
0.0016
Cb medulloblastoma
CTGAGCTGCA (
4
)
4.6
0.0046
Cb medulloblastoma
GTGGGACCCA
(
4
)
2.3
0.0023
Cb medulloblastoma
TTGAGGGCAA
2.3
0.0023
P8 GC+1d culture
CTGAGCTGCA (
4
)
24
0.024
P8 GC+1d culture
GTGGGACCCA
(
4
)
5.7
0.0057
P8 GC+SHH+1d culture
CTGAGCTGCA (
4
)
16.4
0.0164
P8 GC+SHH+1d culture
GTGGGACCCA
(
4
)
1.2
0.0012
3T3 fibroblasts
CTGAGCTGCA (
4
)
10.5
0.0105
3T3 fibroblasts
GTGGGACCCA
(
4
)
3.5
0.0035
E15 cortex
GTGGGACCCA
(
4
)
24.7
0.0247
E15 cortex
CTGAGCTGCA (
4
)
9.9
0.0099
E15 cortex
AGTGCTGATG
4.9
0.0049
P1 cortex
CTGAGCTGCA (
4
)
9.1
0.0091
P1 cortex
GTGGGACCCA
(
4
)
4.5
0.0045
Hypothalamus
CTGAGCTGCA (
4
)
5.4
0.0054
Hypothalamus
GTGGGACCCA
(
4
)
5.4
0.0054
Hypothalamus
TTGAGGGCAA
1.8
0.0018
E12.5 retina
CTGAGCTGCA (
4
)
16.9
0.0169
E12.5 retina
GTGGGACCCA
(
4
)
3.8
0.0038
E14.5 retina
CTGAGCTGCA (
4
)
18.2
0.0182
E16.5 retina
CTGAGCTGCA (
4
)
21.7
0.0217
E16.5 retina
GTGGGACCCA
(
4
)
5.4
0.0054
E18.5 retina
CTGAGCTGCA (
4
)
21.8
0.0218
E18.5 retina
GTGGGACCCA
(
4
)
3.6
0.0036
E18.5 retina
TTATTTAAAA
(
5
)
3.6
0.0036
E18.5 retina
AGTGCTGATG
1.8
0.0018
P0.5 retina
CTGAGCTGCA (
4
)
17.7
0.0177
P0.5 retina
CTACAAAAGG
2
0.002
P2.5 retina
CTGAGCTGCA (
4
)
26.4
0.0264
P2.5 retina
GTGGGACCCA
(
4
)
5.3
0.0053
P4.5 retina
CTGAGCTGCA (
4
)
33.7
0.0337
P6.5 retina
CTGAGCTGCA (
4
)
26.7
0.0267
P6.5 retina
AGTGCTGATG
3.3
0.0033
P6.5 retina
GTGGGACCCA
(
4
)
1.7
0.0017
P10.5 crx- retina
CTGAGCTGCA (
4
)
33.4
0.0334
P10.5 crx- retina
GTGGGACCCA
(
4
)
5.6
0.0056
P10.5 crx- retina
TTGAGGGCAA
1.9
0.0019
P10.5 crx+ retina
CTGAGCTGCA (
4
)
32.7
0.0327
P10.5 crx+ retina
TTATTTAAAA
(
5
)
1.9
0.0019
Adult retinal
CTGAGCTGCA (
4
)
25.9
0.0259
Adult retinal
GTGGGACCCA
(
4
)
3.7
0.0037
ONL
CTGAGCTGCA (
4
)
1.9
0.0019
