Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.332336
9130413I22Rik
RIKEN cDNA 9130413I22 gene
5
67568
Human Homolog
PGR1[protein associated with MRG, 14 kDa]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 119 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTAATAAAAG
(
4
)
42.4
0.0424
P8 Cb GC
GAGTCTTCGA
13.1
0.0131
P8 Cb GC
ACACCCTGGA
4.9
0.0049
P8 Cb GC
GAAAATATGA (
8
)
3.3
0.0033
P8 Cb GC
GCTAGGACTG
3.3
0.0033
P8 Cb GC
GTAAGGGTTT
(
3
)
3.3
0.0033
P8 Cb GC
GACAGCTGTG (
3
)
1.6
0.0016
P8 Cb GC
GGAAGGGGCG (
2
)
1.6
0.0016
P8 Cb GC
GGCCCCTGGC (
2
)
1.6
0.0016
P8 Cb GC
TTGAAAACAA
1.6
0.0016
Cb medulloblastoma
TTAATAAAAG
(
4
)
41.6
0.0416
Cb medulloblastoma
ACACCCTGGA
6.9
0.0069
Cb medulloblastoma
GAGTCTTCGA
4.6
0.0046
P8 GC+1d culture
TTAATAAAAG
(
4
)
44.5
0.0445
P8 GC+1d culture
ACACCCTGGA
17.1
0.0171
P8 GC+1d culture
GAGTCTTCGA
11.4
0.0114
P8 GC+1d culture
GCTAGGACTG
1.1
0.0011
P8 GC+1d culture
GGGAACCCCT (
9
)
1.1
0.0011
P8 GC+1d culture
GTAAGGGTTT
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TTAATAAAAG
(
4
)
53.9
0.0539
P8 GC+SHH+1d culture
ACACCCTGGA
22.2
0.0222
P8 GC+SHH+1d culture
GAGTCTTCGA
5.9
0.0059
P8 GC+SHH+1d culture
GCTAGGACTG
3.5
0.0035
P8 GC+SHH+1d culture
TTTATAAAAA (
6
)
3.5
0.0035
P8 GC+SHH+1d culture
GGAAGGGGCG (
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TTGAAAACAA
1.2
0.0012
3T3 fibroblasts
GAGTCTTCGA
28
0.028
3T3 fibroblasts
ACACCCTGGA
14
0.014
3T3 fibroblasts
GGAAGGGGCG (
2
)
3.5
0.0035
3T3 fibroblasts
TTAATAAAAG
(
4
)
3.5
0.0035
E15 cortex
GAGTCTTCGA
9.9
0.0099
E15 cortex
GACAGCTGTG (
3
)
4.9
0.0049
E15 cortex
GGCCCCTGGC (
2
)
4.9
0.0049
P1 cortex
GGGAACCCCT (
9
)
9.1
0.0091
P1 cortex
TTAATAAAAG
(
4
)
9.1
0.0091
P1 cortex
GAGTCTTCGA
4.5
0.0045
Hypothalamus
TTAATAAAAG
(
4
)
63.4
0.0634
Hypothalamus
ACACCCTGGA
27.2
0.0272
Hypothalamus
GAGTCTTCGA
10.9
0.0109
Hypothalamus
GCTAGGACTG
3.6
0.0036
Hypothalamus
GTAAGGGTTT
(
3
)
3.6
0.0036
Hypothalamus
TCAGTCGTCG
1.8
0.0018
Hypothalamus
TTTATAAAAA (
6
)
1.8
0.0018
E12.5 retina
ACACCCTGGA
16.9
0.0169
E12.5 retina
GAGTCTTCGA
11.3
0.0113
E12.5 retina
TTAATAAAAG
(
4
)
11.3
0.0113
E12.5 retina
GCTAGGACTG
1.9
0.0019
E12.5 retina
GGGAACCCCT (
9
)
1.9
0.0019
E12.5 retina
TTGAAAACAA
1.9
0.0019
E14.5 retina
TTAATAAAAG
(
4
)
38.3
0.0383
E14.5 retina
GTAAGGGTTT
(
3
)
5.5
0.0055
E14.5 retina
ACACCCTGGA
3.6
0.0036
E14.5 retina
GAGTCTTCGA
3.6
0.0036
E14.5 retina
GACAGCTGTG (
3
)
1.8
0.0018
E14.5 retina
GCTAGGACTG
1.8
0.0018
E14.5 retina
GGGAACCCCT (
9
)
1.8
0.0018
E14.5 retina
TCAGTCGTCG
1.8
0.0018
E14.5 retina
TGGTTACTTA (
2
)
1.8
0.0018
E16.5 retina
TTAATAAAAG
(
4
)
43.5
0.0435
E16.5 retina
GGGAACCCCT (
9
)
5.4
0.0054
E16.5 retina
GACAGCTGTG (
3
)
3.6
0.0036
E16.5 retina
ACACCCTGGA
1.8
0.0018
E16.5 retina
GCTAGGACTG
1.8
0.0018
E16.5 retina
GTAAGGGTTT
(
3
)
1.8
0.0018
E16.5 retina
TGGTTACTTA (
2
)
1.8
0.0018
E18.5 retina
TTAATAAAAG
(
4
)
65.5
0.0655
E18.5 retina
ACACCCTGGA
18.2
0.0182
E18.5 retina
GAGTCTTCGA
5.5
0.0055
E18.5 retina
GGGAACCCCT (
9
)
3.6
0.0036
E18.5 retina
GCTAGGACTG
1.8
0.0018
E18.5 retina
GGAAGGGGCG (
2
)
1.8
0.0018
E18.5 retina
GTAAGGGTTT
(
3
)
1.8
0.0018
P0.5 retina
GAGTCTTCGA
19.6
0.0196
P0.5 retina
GGGAACCCCT (
9
)
11.8
0.0118
P0.5 retina
ACACCCTGGA
5.9
0.0059
P0.5 retina
TTAATAAAAG
(
4
)
5.9
0.0059
P0.5 retina
GCTAGGACTG
2
0.002
P2.5 retina
TTAATAAAAG
(
4
)
42.2
0.0422
P2.5 retina
ACACCCTGGA
26.4
0.0264
P2.5 retina
GAGTCTTCGA
3.5
0.0035
P2.5 retina
GGGAACCCCT (
9
)
3.5
0.0035
P2.5 retina
GAAAATATGA (
8
)
1.8
0.0018
P2.5 retina
GACAGCTGTG (
3
)
1.8
0.0018
P2.5 retina
GCTAGGACTG
1.8
0.0018
P2.5 retina
TTTATAAAAA (
6
)
1.8
0.0018
P4.5 retina
TTAATAAAAG
(
4
)
71.3
0.0713
P4.5 retina
ACACCCTGGA
23.8
0.0238
P4.5 retina
GAGTCTTCGA
4
0.004
P4.5 retina
GGGAACCCCT (
9
)
4
0.004
P6.5 retina
TTAATAAAAG
(
4
)
40
0.04
P6.5 retina
GAGTCTTCGA
10
0.01
P6.5 retina
ACACCCTGGA
6.7
0.0067
P6.5 retina
GAAAATATGA (
8
)
1.7
0.0017
P6.5 retina
GCTAGGACTG
1.7
0.0017
P6.5 retina
TTCATCAAAG
(
2
)
1.7
0.0017
P6.5 retina
TTTATAAAAA (
6
)
1.7
0.0017
P10.5 crx- retina
TTAATAAAAG
(
4
)
13
0.013
P10.5 crx- retina
GTAAGGGTTT
(
3
)
5.6
0.0056
P10.5 crx- retina
ACACCCTGGA
3.7
0.0037
P10.5 crx- retina
GAGTCTTCGA
3.7
0.0037
P10.5 crx- retina
TTCATCAAAG
(
2
)
1.9
0.0019
P10.5 crx+ retina
ACACCCTGGA
34.6
0.0346
P10.5 crx+ retina
TTAATAAAAG
(
4
)
26.9
0.0269
P10.5 crx+ retina
GAGTCTTCGA
1.9
0.0019
P10.5 crx+ retina
GCTAGGACTG
1.9
0.0019
P10.5 crx+ retina
GGGAACCCCT (
9
)
1.9
0.0019
Adult retinal
ACACCCCGGA (
2
)
7.4
0.0074
Adult retinal
TTAATAAAAG
(
4
)
7.4
0.0074
Adult retinal
GAGTCTTCGA
1.9
0.0019
Adult retinal
GCTAGGACTG
1.9
0.0019
Adult retinal
GGGAACCCCT (
9
)
1.9
0.0019
Adult retinal
TTCATCAAAG
(
2
)
1.9
0.0019
ONL
TTAATAAAAG
(
4
)
17.2
0.0172
ONL
ACACCCTGGA
7.7
0.0077
ONL
TCAGTCGTCG
7.7
0.0077
ONL
TTTATAAAAA (
6
)
5.7
0.0057
ONL
ACACCCCGGA (
2
)
3.8
0.0038
ONL
GAAAATATGA (
8
)
1.9
0.0019
ONL
GAGTCTTCGA
1.9
0.0019
