Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.332901
C230037E05Rik
RIKEN cDNA C230037E05 gene
6
30910
Mm.332901
2210017G18Rik
RIKEN cDNA 2210017G18 gene
6
70386
Mm.332901
Ppp1r9a
protein phosphatase 1, regulatory (inhibitor) subunit 9A
6
243725
Mm.332901
2810430P21Rik
RIKEN cDNA 2810430P21 gene
6
72734
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 60 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCTACTGAGG (
7
)
1.6
0.0016
P8 Cb GC
GGAGAAACAG
(
6
)
1.6
0.0016
Cb medulloblastoma
CAGTTACAGA (
7
)
2.3
0.0023
Cb medulloblastoma
GGAGAAACAG
(
6
)
2.3
0.0023
P8 GC+1d culture
CAGTTACAGA (
7
)
2.3
0.0023
P8 GC+1d culture
AAGTTGTCAC
(
7
)
1.1
0.0011
P8 GC+1d culture
GCTACTGAGG (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
AAATAACAAT
(
5
)
2.3
0.0023
P8 GC+SHH+1d culture
CCACTTGTGT
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GCTACTGAGG (
7
)
1.2
0.0012
E15 cortex
AAATAACAAT
(
5
)
4.9
0.0049
E15 cortex
CAAATGACCA
(
4
)
4.9
0.0049
P1 cortex
AAATAACAAT
(
5
)
4.5
0.0045
P1 cortex
CACAATAGTG (
5
)
4.5
0.0045
P1 cortex
GTTTAATGAA
(
5
)
4.5
0.0045
Hypothalamus
CCACTTGTGT
(
4
)
1.8
0.0018
Hypothalamus
GCTACTGAGG (
7
)
1.8
0.0018
Hypothalamus
GGAGAAACAG
(
6
)
1.8
0.0018
E12.5 retina
GTTTAATGAA
(
5
)
5.6
0.0056
E12.5 retina
CAGTTACAGA (
7
)
3.8
0.0038
E12.5 retina
AAGTTGTCAC
(
7
)
1.9
0.0019
E14.5 retina
GTTTAATGAA
(
5
)
10.9
0.0109
E14.5 retina
CAAATGACCA
(
4
)
1.8
0.0018
E16.5 retina
GTTTAATGAA
(
5
)
5.4
0.0054
E16.5 retina
AAATAACAAT
(
5
)
3.6
0.0036
E18.5 retina
GTTTAATGAA
(
5
)
3.6
0.0036
E18.5 retina
GGAGAAACAG
(
6
)
1.8
0.0018
P0.5 retina
GTTTAATGAA
(
5
)
3.9
0.0039
P0.5 retina
GCTACTGAGG (
7
)
2
0.002
P0.5 retina
GGAGAAACAG
(
6
)
2
0.002
P2.5 retina
GTTTAATGAA
(
5
)
5.3
0.0053
P2.5 retina
CAAATGACCA
(
4
)
1.8
0.0018
P2.5 retina
GCTACTGAGG (
7
)
1.8
0.0018
P2.5 retina
GGAGAAACAG
(
6
)
1.8
0.0018
P4.5 retina
GTTTAATGAA
(
5
)
9.9
0.0099
P4.5 retina
CAAATGACCA
(
4
)
4
0.004
P4.5 retina
AAGTTGTCAC
(
7
)
2
0.002
P6.5 retina
GCTACTGAGG (
7
)
5
0.005
P6.5 retina
AAATAACAAT
(
5
)
1.7
0.0017
P6.5 retina
AAGTTGTCAC
(
7
)
1.7
0.0017
P6.5 retina
CCACTTGTGT
(
4
)
1.7
0.0017
P6.5 retina
GGAGAAACAG
(
6
)
1.7
0.0017
P6.5 retina
GTTTAATGAA
(
5
)
1.7
0.0017
P10.5 crx- retina
CAGTTACAGA (
7
)
3.7
0.0037
P10.5 crx- retina
GGAGAAACAG
(
6
)
3.7
0.0037
P10.5 crx- retina
AAATAACAAT
(
5
)
1.9
0.0019
P10.5 crx- retina
CCACTTGTGT
(
4
)
1.9
0.0019
P10.5 crx+ retina
GGAGAAACAG
(
6
)
7.7
0.0077
P10.5 crx+ retina
GTTTAATGAA
(
5
)
5.8
0.0058
P10.5 crx+ retina
CCACTTGTGT
(
4
)
1.9
0.0019
Adult retinal
GCTACTGAGG (
7
)
3.7
0.0037
Adult retinal
AAATAACAAT
(
5
)
1.9
0.0019
Adult retinal
CACAATAGTG (
5
)
1.9
0.0019
Adult retinal
CAGTTACAGA (
7
)
1.9
0.0019
Adult retinal
CCACTTGTGT
(
4
)
1.9
0.0019
Adult retinal
GTTTAATGAA
(
5
)
1.9
0.0019
ONL
GTTTAATGAA
(
5
)
7.7
0.0077
ONL
AAATAACAAT
(
5
)
1.9
0.0019
ONL
CACAATAGTG (
5
)
1.9
0.0019
ONL
GGAGAAACAG
(
6
)
1.9
0.0019
