Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.332967	Ube2h	ubiquitin-conjugating enzyme E2H	6	6 6.5 cM	22214
Gene Ontology	ligase activity | protein modification | ubiquitin conjugating enzyme activity | ubiquitin cycle | ubiquitin-dependent protein catabolism | ubiquitin-protein ligase activity
Human Homolog	UBE2H[ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGGTGCTAC (2) 3.3 0.0033 P8 Cb GC AGGAAAACAG (5) 1.6 0.0016 P8 Cb GC CAAACCCTCC (4) 1.6 0.0016 P8 Cb GC GGTTCAGGAA (4) 1.6 0.0016 P8 Cb GC TCTGTCACCT (2) 1.6 0.0016 Cb medulloblastoma TCTGTCACCT (2) 9.2 0.0092 Cb medulloblastoma AGGAAAACAG (5) 2.3 0.0023 Cb medulloblastoma TGGGTGCTAC (2) 2.3 0.0023 P8 GC+1d culture GCGGATTCTG (2) 5.7 0.0057 P8 GC+1d culture TCTGTCACCT (2) 4.6 0.0046 P8 GC+1d culture CAAACCCTCC (4) 3.4 0.0034 P8 GC+1d culture TCTTTTGGGG (3) 2.3 0.0023 P8 GC+1d culture AATAAAATTT (3) 1.1 0.0011 P8 GC+1d culture AGGAAAACAG (5) 1.1 0.0011 P8 GC+1d culture GGTTCAGGAA (4) 1.1 0.0011 P8 GC+SHH+1d culture TCTGTCACCT (2) 9.4 0.0094 P8 GC+SHH+1d culture TGGGTGCTAC (2) 5.9 0.0059 P8 GC+SHH+1d culture TCTTTTGGGG (3) 2.3 0.0023 P8 GC+SHH+1d culture AATAAAATTT (3) 1.2 0.0012 P8 GC+SHH+1d culture AGGAAAACAG (5) 1.2 0.0012 P8 GC+SHH+1d culture GCGGATTCTG (2) 1.2 0.0012 3T3 fibroblasts GCGGATTCTG (2) 10.5 0.0105 3T3 fibroblasts TCTGTCACCT (2) 3.5 0.0035 3T3 fibroblasts TGGGTGCTAC (2) 3.5 0.0035 E15 cortex CAAACCCTCC (4) 4.9 0.0049 E15 cortex GGTTCAGGAA (4) 4.9 0.0049 E15 cortex TCTGTCACCT (2) 4.9 0.0049 E15 cortex TGGGTGCTAC (2) 4.9 0.0049 P1 cortex CAAACCCTCC (4) 4.5 0.0045 Hypothalamus TGGCAGCTCT (2) 3.6 0.0036 Hypothalamus ATATAAATAT (2) 1.8 0.0018 Hypothalamus GCTGCTTTAA (4) 1.8 0.0018 Hypothalamus GGTTCAGGAA (4) 1.8 0.0018 Hypothalamus TCTGTCACCT (2) 1.8 0.0018 E12.5 retina TCTGTCACCT (2) 5.6 0.0056 E12.5 retina AATAAAATTT (3) 1.9 0.0019 E14.5 retina ATATAAATAT (2) 1.8 0.0018 E14.5 retina TCTGTCACCT (2) 1.8 0.0018 E14.5 retina TCTTTTGGGG (3) 1.8 0.0018 E14.5 retina TGGGTGCTAC (2) 1.8 0.0018 E16.5 retina AATAAAATTT (3) 1.8 0.0018 E16.5 retina GCGGATTCTG (2) 1.8 0.0018 E16.5 retina GCTGCTTTAA (4) 1.8 0.0018 E16.5 retina TCTGTCACCT (2) 1.8 0.0018 E16.5 retina TGGCAGCTCT (2) 1.8 0.0018 E18.5 retina GCTGCTTTAA (4) 10.9 0.0109 E18.5 retina TCTGTCACCT (2) 7.3 0.0073 E18.5 retina TGGGTGCTAC (2) 3.6 0.0036 E18.5 retina AATAAAATTT (3) 1.8 0.0018 P0.5 retina GCGGATTCTG (2) 5.9 0.0059 P0.5 retina GCTGCTTTAA (4) 3.9 0.0039 P0.5 retina AGGAAAACAG (5) 2 0.002 P0.5 retina GGTTCAGGAA (4) 2 0.002 P0.5 retina TCTGTCACCT (2) 2 0.002 P0.5 retina TGGCAGCTCT (2) 2 0.002 P2.5 retina TCTGTCACCT (2) 5.3 0.0053 P2.5 retina TGGGTGCTAC (2) 5.3 0.0053 P2.5 retina AATAAAATTT (3) 3.5 0.0035 P2.5 retina AGGAAAACAG (5) 1.8 0.0018 P2.5 retina CAAACCCTCC (4) 1.8 0.0018 P2.5 retina GCTGCTTTAA (4) 1.8 0.0018 P2.5 retina TGGCAGCTCT (2) 1.8 0.0018 P4.5 retina TGGGTGCTAC (2) 5.9 0.0059 P4.5 retina AGGAAAACAG (5) 4 0.004 P4.5 retina TCTGTCACCT (2) 4 0.004 P4.5 retina GGTTCAGGAA (4) 2 0.002 P4.5 retina TGGCAGCTCT (2) 2 0.002 P6.5 retina GCTGCTTTAA (4) 1.7 0.0017 P6.5 retina GGTTCAGGAA (4) 1.7 0.0017 P6.5 retina TCTGTCACCT (2) 1.7 0.0017 P6.5 retina TGGGTGCTAC (2) 1.7 0.0017 P10.5 crx- retina TCTGTCACCT (2) 5.6 0.0056 P10.5 crx- retina GCTGCTTTAA (4) 3.7 0.0037 P10.5 crx- retina GGTTCAGGAA (4) 1.9 0.0019 P10.5 crx+ retina GCTGCTTTAA (4) 7.7 0.0077 P10.5 crx+ retina TCTGTCACCT (2) 7.7 0.0077 P10.5 crx+ retina TGGGTGCTAC (2) 1.9 0.0019 Adult retinal TGGGTGCTAC (2) 3.7 0.0037 ONL TCTGTCACCT (2) 5.7 0.0057 ONL ATATAAATAT (2) 3.8 0.0038 ONL TCTTTTGGGG (3) 3.8 0.0038 ONL TGGGTGCTAC (2) 3.8 0.0038 ONL AGGAAAACAG (5) 1.9 0.0019 ONL GCTGCTTTAA (4) 1.9 0.0019