Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.333148	Cd8b	CD8 antigen, beta chain	6	6 30.5 cM	12526
Gene Ontology	cell surface | external side of plasma membrane | immune response | integral to membrane | plasma membrane
Human Homolog	CD8B1[CD8 antigen, beta polypeptide 1 (p37)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC GCTCTGGCTG (8) 3.3 0.0033 P8 Cb GC AATAAAGTTT (2) 1.6 0.0016 P8 Cb GC TACTCTTCCC (5) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma GCTCTGGCTG (8) 20.8 0.0208 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture GCTCTGGCTG (8) 4.6 0.0046 P8 GC+1d culture CCTTTGGTCC (8) 2.3 0.0023 P8 GC+1d culture AATAAAGTTT (2) 1.1 0.0011 P8 GC+1d culture TACTCTTCCC (5) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CCTTTGGTCC (8) 2.3 0.0023 P8 GC+SHH+1d culture AATAAAGTTT (2) 1.2 0.0012 P8 GC+SHH+1d culture GCTCTGGCTG (8) 1.2 0.0012 P8 GC+SHH+1d culture GTGGTGTGGG (10) 1.2 0.0012 P8 GC+SHH+1d culture TACTCTTCCC (5) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex GCTCTGGCTG (8) 9.9 0.0099 E15 cortex AATAAAGTTT (2) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex CCTTTGGTCC (8) 4.5 0.0045 P1 cortex GCTCTGGCTG (8) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus GCTCTGGCTG (8) 16.3 0.0163 Hypothalamus CGCGCGCGCG (3) 1.8 0.0018 Hypothalamus TACTCTTCCC (5) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina GCTCTGGCTG (8) 9.4 0.0094 E12.5 retina TACTCTTCCC (5) 3.8 0.0038 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina AATAAAGTTT (2) 3.6 0.0036 E14.5 retina GCTCTGGCTG (8) 3.6 0.0036 E14.5 retina CCTTTGGTCC (8) 1.8 0.0018 E14.5 retina TACTCTTCCC (5) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina GCTCTGGCTG (8) 14.5 0.0145 E16.5 retina AATAAAGTTT (2) 1.8 0.0018 E16.5 retina CCTTTGGTCC (8) 1.8 0.0018 E16.5 retina GTGGTGTGGG (10) 1.8 0.0018 E16.5 retina TACTCTTCCC (5) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina GCTCTGGCTG (8) 9.1 0.0091 E18.5 retina TACTCTTCCC (5) 3.6 0.0036 E18.5 retina AATAAAGTTT (2) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina GCTCTGGCTG (8) 23.6 0.0236 P0.5 retina AATAAAGTTT (2) 3.9 0.0039 P0.5 retina TACTCTTCCC (5) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina GCTCTGGCTG (8) 15.8 0.0158 P2.5 retina CCTTTGGTCC (8) 5.3 0.0053 P2.5 retina AATAAAGTTT (2) 3.5 0.0035 P2.5 retina GTGGTGTGGG (10) 1.8 0.0018 P2.5 retina TACTCTTCCC (5) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina GCTCTGGCTG (8) 11.9 0.0119 P4.5 retina CGCGCGCGCG (3) 2 0.002 P4.5 retina TACTCTTCCC (5) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina GCTCTGGCTG (8) 20 0.02 P6.5 retina GTGGTGTGGG (10) 3.3 0.0033 P6.5 retina TACTCTTCCC (5) 3.3 0.0033 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina GCTCTGGCTG (8) 20.4 0.0204 P10.5 crx- retina CGCGCGCGCG (3) 1.9 0.0019 P10.5 crx- retina GTGGTGTGGG (10) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina GCTCTGGCTG (8) 9.6 0.0096 P10.5 crx+ retina CGCGCGCGCG (3) 1.9 0.0019 P10.5 crx+ retina GTGGTGTGGG (10) 1.9 0.0019 P10.5 crx+ retina TACTCTTCCC (5) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal GCTCTGGCTG (8) 3.7 0.0037 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GCTCTGGCTG (8) 5.7 0.0057 ONL AATAAAGTTT (2) 1.9 0.0019 ONL CCTTTGGTCC (8) 1.9 0.0019