Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.333406	Ccnd2	cyclin D2	6	6 F3 (6 61.1 cM)	12444
Gene Ontology	cell cycle | cyclin-dependent protein kinase regulator activity | nucleus | protein binding | regulation of cell cycle | regulation of cell cycle
Human Homolog	CCND2[cyclin D2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 13 In Situ Hybridization Images

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SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGCTACTCCG 34.3 0.0343 P8 Cb GC TACCTCAGAT 13.1 0.0131 P8 Cb GC ACCAAAACGC 8.2 0.0082 P8 Cb GC GACAAAAAAA (15) 6.5 0.0065 P8 Cb GC GAAAGAAAGG (4) 4.9 0.0049 P8 Cb GC TACCCGCCAT (2) 3.3 0.0033 P8 Cb GC TTCCTAGCTT 3.3 0.0033 P8 Cb GC GGAGTGACTA (2) 1.6 0.0016 P8 Cb GC TACCCGCCGT 1.6 0.0016 Cb medulloblastoma GACAAAAAAA (15) 11.6 0.0116 Cb medulloblastoma GAAAATATTC (5) 4.6 0.0046 Cb medulloblastoma AAACTATTGA (5) 2.3 0.0023 P8 GC+1d culture CGCTACTCCG 13.7 0.0137 P8 GC+1d culture GACAAAAAAA (15) 9.1 0.0091 P8 GC+1d culture TACCTCAGAT 4.6 0.0046 P8 GC+1d culture TTTCTTTTCT (5) 4.6 0.0046 P8 GC+1d culture AAACTATTGA (5) 3.4 0.0034 P8 GC+1d culture ACCAAAACGC 3.4 0.0034 P8 GC+1d culture CAAATCAGGC 3.4 0.0034 P8 GC+1d culture TACCCGCCAT (2) 2.3 0.0023 P8 GC+1d culture TTCTAGCTTC 2.3 0.0023 P8 GC+1d culture ATCCTGGGGC (2) 1.1 0.0011 P8 GC+1d culture GAAAGAAAGG (4) 1.1 0.0011 P8 GC+1d culture GAGATAATTC (3) 1.1 0.0011 P8 GC+1d culture TACCCGCCGT 1.1 0.0011 P8 GC+SHH+1d culture CGCTACTCCG 21.1 0.0211 P8 GC+SHH+1d culture TACCTCAGAT 19.9 0.0199 P8 GC+SHH+1d culture ACCAAAACGC 5.9 0.0059 P8 GC+SHH+1d culture CAAATCAGGC 5.9 0.0059 P8 GC+SHH+1d culture GACAAAAAAA (15) 5.9 0.0059 P8 GC+SHH+1d culture GAAAGAAAGG (4) 3.5 0.0035 P8 GC+SHH+1d culture TACCCGCCAT (2) 3.5 0.0035 P8 GC+SHH+1d culture AAACTATTGA (5) 2.3 0.0023 P8 GC+SHH+1d culture GACAAACATA 2.3 0.0023 P8 GC+SHH+1d culture TGGACTGAAT (2) 2.3 0.0023 P8 GC+SHH+1d culture TTCCTAGCTT 2.3 0.0023 P8 GC+SHH+1d culture ATCCTGGGGC (2) 1.2 0.0012 3T3 fibroblasts CGCTACTCCG 31.5 0.0315 3T3 fibroblasts TACCCGCCAT (2) 14 0.014 3T3 fibroblasts ACCAAAACGC 7 0.007 3T3 fibroblasts GGAGTGACTA (2) 3.5 0.0035 3T3 fibroblasts TACCTCAGAT 3.5 0.0035 E15 cortex CGCTACTCCG 34.6 0.0346 E15 cortex ACCAAAACGC 14.8 0.0148 E15 cortex TACCTCAGAT 14.8 0.0148 E15 cortex GAAAATATTC (5) 4.9 0.0049 E15 cortex GAGATAATTC (3) 4.9 0.0049 P1 cortex CAAATCAGGC 4.5 0.0045 P1 cortex GAAAGAAAGG (4) 4.5 0.0045 P1 cortex GACAAAAAAA (15) 4.5 0.0045 P1 cortex TACCTCAGAT 4.5 0.0045 P1 cortex TTTCTTTTCT (5) 4.5 0.0045 Hypothalamus GACAAAAAAA (15) 3.6 0.0036 Hypothalamus GGAGTGACTA (2) 1.8 0.0018 Hypothalamus TGGACTGAAT (2) 1.8 0.0018 Hypothalamus TTCTAGCTTC 1.8 0.0018 E12.5 retina GACAAAAAAA (15) 1.9 0.0019 E12.5 retina GACAAACATA 1.9 0.0019 E12.5 retina TACCTCAGAT 1.9 0.0019 E14.5 retina AAACTATTGA (5) 1.8 0.0018 E14.5 retina ATCCTGGGGC (2) 1.8 0.0018 E14.5 retina GACAAAAAAA (15) 1.8 0.0018 E16.5 retina AAACTATTGA (5) 3.6 0.0036 E16.5 retina GGAGTGACTA (2) 1.8 0.0018 E18.5 retina AAACTATTGA (5) 1.8 0.0018 E18.5 retina GACAAAAAAA (15) 1.8 0.0018 E18.5 retina GGAGTGACTA (2) 1.8 0.0018 E18.5 retina TACCTCAGAT 1.8 0.0018 P0.5 retina AAACTATTGA (5) 3.9 0.0039 P0.5 retina TACCCGCCGT 2 0.002 P0.5 retina TTCCTAGCTT 2 0.002 P2.5 retina AAACTATTGA (5) 5.3 0.0053 P2.5 retina CGCTACTCCG 1.8 0.0018 P2.5 retina GAGATAATTC (3) 1.8 0.0018 P2.5 retina TACCCGCCGT 1.8 0.0018 P4.5 retina GGAGTGACTA (2) 5.9 0.0059 P4.5 retina AAACTATTGA (5) 4 0.004 P4.5 retina GAAAGAAAGG (4) 2 0.002 P4.5 retina GACAAAAAAA (15) 2 0.002 P6.5 retina GGAGTGACTA (2) 5 0.005 P6.5 retina AAACTATTGA (5) 1.7 0.0017 P6.5 retina ATCCTGGGGC (2) 1.7 0.0017 P6.5 retina GACAAAAAAA (15) 1.7 0.0017 P6.5 retina TTTCTTTTCT (5) 1.7 0.0017 P10.5 crx- retina AAACTATTGA (5) 7.4 0.0074 P10.5 crx- retina GAAAATATTC (5) 1.9 0.0019 P10.5 crx+ retina GACAAAAAAA (15) 3.8 0.0038 P10.5 crx+ retina GGAGTGACTA (2) 3.8 0.0038 Adult retinal GACAAAAAAA (15) 1.9 0.0019 Adult retinal GGAGTGACTA (2) 1.9 0.0019 ONL GACAAAAAAA (15) 3.8 0.0038