Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.333515
2810474O19Rik
RIKEN cDNA 2810474O19 gene
6
67246
Mm.333515
6720435I21Rik
RIKEN cDNA 6720435I21 gene
6
77734
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
AACATTCCCT (
4
)
4.9
0.0049
P8 Cb GC
TTGGTTTTCA
(
5
)
1.6
0.0016
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
ACCTTGGAAG (
12
)
2.3
0.0023
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
ACCTTGGAAG (
12
)
1.1
0.0011
P8 GC+1d culture
GTAAAGACTT
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
ACCTTGGAAG (
12
)
2.3
0.0023
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
GTAAAGACTT
(
3
)
4.5
0.0045
P1 cortex
TCTTTCTCTT
(
7
)
4.5
0.0045
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
TTGGTTTTCA
(
5
)
5.4
0.0054
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
AACATTCCCT (
4
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
AACATTCCCT (
4
)
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
ACCTTGGAAG (
12
)
2
0.002
P0.5 retina
GTAAAGACTT
(
3
)
2
0.002
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
AACATTCCCT (
4
)
2
0.002
P4.5 retina
TCTTTCTCTT
(
7
)
2
0.002
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
ACCTTGGAAG (
12
)
3.3
0.0033
P6.5 retina
TTGGTTTTCA
(
5
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
ACCTTGGAAG (
12
)
5.6
0.0056
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
ACCTTGGAAG (
12
)
5.8
0.0058
P10.5 crx+ retina
TTGGTTTTCA
(
5
)
3.8
0.0038
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
ACCTTGGAAG (
12
)
3.7
0.0037
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
TCTTTCTCTT
(
7
)
1.9
0.0019
