Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.333649	Tomm40	translocase of outer mitochondrial membrane 40 homolog (yeast)	7		53333
Gene Ontology	anion transport | integral to membrane | mitochondrial outer membrane | mitochondrion | outer membrane | protein transport | transport | voltage-dependent ion-selective channel activity
Human Homolog	TOMM40[translocase of outer mitochondrial membrane 40 homolog (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC TCTCTAGCTG (8) 6.5 0.0065 P8 Cb GC TTTATAAGTT (2) 6.5 0.0065 P8 Cb GC GGAGGTCCCT (3) 4.9 0.0049 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma GGAGGTCCCT (3) 4.6 0.0046 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture GGAGGTCCCT (3) 5.7 0.0057 P8 GC+1d culture TCTCTAGCTG (8) 2.3 0.0023 P8 GC+1d culture TTTATAAGTT (2) 1.1 0.0011 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture TCTCTAGCTG (8) 4.7 0.0047 P8 GC+SHH+1d culture TTTATAAGTT (2) 3.5 0.0035 P8 GC+SHH+1d culture GGAGGTCCCT (3) 1.2 0.0012 3T3 fibroblasts GGAGGTCCCT (3) 3.5 0.0035 3T3 fibroblasts TCTCTAGCTG (8) 3.5 0.0035 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex GGAGGTCCCT (3) 9.9 0.0099 E15 cortex TCTCTAGCTG (8) 9.9 0.0099 E15 cortex TTTATAAGTT (2) 4.9 0.0049 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex GGAGGTCCCT (3) 9.1 0.0091 P1 cortex TCTCTAGCTG (8) 4.5 0.0045 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus TTTATAAGTT (2) 3.6 0.0036 Hypothalamus ATTTCTATGG (6) 1.8 0.0018 Hypothalamus GGAGGTCCCT (3) 1.8 0.0018 Hypothalamus TCTCTAGCTG (8) 1.8 0.0018 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina GGAGGTCCCT (3) 1.9 0.0019 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina TTTATAAGTT (2) 10.9 0.0109 E14.5 retina GGAGGTCCCT (3) 3.6 0.0036 E14.5 retina TCTCTAGCTG (8) 1.8 0.0018 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina GGAGGTCCCT (3) 7.2 0.0072 E16.5 retina TTTATAAGTT (2) 5.4 0.0054 E16.5 retina ATTTCTATGG (6) 3.6 0.0036 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina GGAGGTCCCT (3) 10.9 0.0109 E18.5 retina TTTATAAGTT (2) 7.3 0.0073 E18.5 retina TCTCTAGCTG (8) 1.8 0.0018 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina GGAGGTCCCT (3) 5.9 0.0059 P0.5 retina TCTCTAGCTG (8) 5.9 0.0059 P0.5 retina TTTATAAGTT (2) 3.9 0.0039 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina GGAGGTCCCT (3) 12.3 0.0123 P2.5 retina TCTCTAGCTG (8) 7 0.007 P2.5 retina TTTATAAGTT (2) 3.5 0.0035 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina GGAGGTCCCT (3) 5.9 0.0059 P4.5 retina TCTCTAGCTG (8) 2 0.002 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina TCTCTAGCTG (8) 10 0.01 P6.5 retina GGAGGTCCCT (3) 6.7 0.0067 P6.5 retina TTTATAAGTT (2) 3.3 0.0033 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina ATTTCTATGG (6) 3.7 0.0037 P10.5 crx- retina TCTCTAGCTG (8) 1.9 0.0019 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina GGAGGTCCCT (3) 5.8 0.0058 P10.5 crx+ retina TCTCTAGCTG (8) 5.8 0.0058 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal GGAGGTCCCT (3) 7.4 0.0074 Adult retinal TCTCTAGCTG (8) 7.4 0.0074 Adult retinal TTTATAAGTT (2) 1.9 0.0019 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL GGAGGTCCCT (3) 3.8 0.0038 ONL TCTCTAGCTG (8) 3.8 0.0038 ONL TTTATAAGTT (2) 1.9 0.0019