Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.333893	Nipa2	non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human)	7		93790
Human Homolog	NIPA2[non imprinted in Prader-Willi/Angelman syndrome 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 68 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTGAGGATT (4) 6.5 0.0065 P8 Cb GC CCGAATATTC (2) 3.3 0.0033 P8 Cb GC GAGGAGGTGG (13) 1.6 0.0016 P8 Cb GC GCTAATTTCT (3) 1.6 0.0016 P8 Cb GC GGAAAATTGG (3) 1.6 0.0016 P8 Cb GC TCCTTAAAAA (5) 1.6 0.0016 P8 Cb GC TGCCAAATAA 1.6 0.0016 Cb medulloblastoma TTTGAGGATT (4) 2.3 0.0023 P8 GC+1d culture TCCTTAAAAA (5) 2.3 0.0023 P8 GC+1d culture GCTAATTTCT (3) 1.1 0.0011 P8 GC+1d culture TGCCAAATAA 1.1 0.0011 P8 GC+SHH+1d culture TTTGAGGATT (4) 5.9 0.0059 P8 GC+SHH+1d culture CCGAATATTC (2) 2.3 0.0023 P8 GC+SHH+1d culture GAAACAGCAA (3) 2.3 0.0023 P8 GC+SHH+1d culture GAGGAGGGGG (7) 1.2 0.0012 P8 GC+SHH+1d culture GCTAATTTCT (3) 1.2 0.0012 3T3 fibroblasts CCGAATATTC (2) 3.5 0.0035 E15 cortex CCGAATATTC (2) 4.9 0.0049 E15 cortex GCTAATTTCT (3) 4.9 0.0049 P1 cortex GCTAATTTCT (3) 4.5 0.0045 P1 cortex GGAAAATGGG (3) 4.5 0.0045 P1 cortex GGAAAATTGG (3) 4.5 0.0045 P1 cortex TCCTTAAAAA (5) 4.5 0.0045 Hypothalamus CCGAATATTC (2) 1.8 0.0018 Hypothalamus GAGGAGGGGG (7) 1.8 0.0018 Hypothalamus GAGGAGGTGG (13) 1.8 0.0018 Hypothalamus GCTAATTTCT (3) 1.8 0.0018 Hypothalamus TGCCAAATAA 1.8 0.0018 Hypothalamus TTTGAGGATT (4) 1.8 0.0018 E12.5 retina GAAACAGCAA (3) 1.9 0.0019 E12.5 retina TCCTTAAAAA (5) 1.9 0.0019 E14.5 retina GGAAAATTGG (3) 3.6 0.0036 E14.5 retina TTTGAGGATT (4) 3.6 0.0036 E14.5 retina GAGGAGGGGG (7) 1.8 0.0018 E14.5 retina GAGGAGGTGG (13) 1.8 0.0018 E16.5 retina TTTGAGGATT (4) 3.6 0.0036 E16.5 retina CCGAATATTC (2) 1.8 0.0018 E16.5 retina GAAACAGCAA (3) 1.8 0.0018 E16.5 retina GAGGAGGTGG (13) 1.8 0.0018 E18.5 retina TTTGAGGATT (4) 3.6 0.0036 E18.5 retina GGAAAATGGG (3) 1.8 0.0018 E18.5 retina GGAAAATTGG (3) 1.8 0.0018 E18.5 retina TCCTTAAAAA (5) 1.8 0.0018 P0.5 retina CCGAATATTC (2) 5.9 0.0059 P0.5 retina TCCTTAAAAA (5) 3.9 0.0039 P0.5 retina GAAACAGCAA (3) 2 0.002 P0.5 retina GGAAAATTGG (3) 2 0.002 P2.5 retina TTTGAGGATT (4) 5.3 0.0053 P2.5 retina CCGAATATTC (2) 1.8 0.0018 P2.5 retina GAAACAGCAA (3) 1.8 0.0018 P2.5 retina GGAAAATGGG (3) 1.8 0.0018 P2.5 retina GGAAAATTGG (3) 1.8 0.0018 P2.5 retina TCCTTAAAAA (5) 1.8 0.0018 P4.5 retina CCGAATATTC (2) 2 0.002 P4.5 retina GAAACAGCAA (3) 2 0.002 P6.5 retina GGCTTCTTCT (8) 5 0.005 P6.5 retina GAAACAGCAA (3) 3.3 0.0033 P6.5 retina TTTGAGGATT (4) 3.3 0.0033 P6.5 retina TCCTTAAAAA (5) 1.7 0.0017 P10.5 crx- retina CCGAATATTC (2) 5.6 0.0056 P10.5 crx- retina TTTGAGGATT (4) 3.7 0.0037 P10.5 crx+ retina GAAACAGCAA (3) 1.9 0.0019 P10.5 crx+ retina TGCCAAATAA 1.9 0.0019 P10.5 crx+ retina TTTGAGGATT (4) 1.9 0.0019 Adult retinal GAGGAGGTGG (13) 1.9 0.0019 ONL GAGGAGGGGG (7) 7.7 0.0077 ONL GAAACAGCAA (3) 3.8 0.0038 ONL TTTGAGGATT (4) 1.9 0.0019