Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.33421
1110012J17Rik
RIKEN cDNA 1110012J17 gene
17
68617
Mm.33421
C130090I23Rik
RIKEN cDNA C130090I23 gene
17
402771
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 52 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGGAGGTGG (
7
)
4.9
0.0049
P8 Cb GC
GAAATAAAGT
(
6
)
3.3
0.0033
P8 Cb GC
AGGAGAGAAG (
3
)
1.6
0.0016
Cb medulloblastoma
GAAATAAAGT
(
6
)
25.4
0.0254
Cb medulloblastoma
TCACCGTGGT
(
4
)
4.6
0.0046
Cb medulloblastoma
AGGAGAGAAG (
3
)
2.3
0.0023
Cb medulloblastoma
TTGAGTTCGG
(
2
)
2.3
0.0023
P8 GC+1d culture
GAAATAAAGT
(
6
)
5.7
0.0057
P8 GC+1d culture
TCACCGTGGT
(
4
)
3.4
0.0034
P8 GC+1d culture
AAGGAGGTGG (
7
)
2.3
0.0023
P8 GC+1d culture
GGCTGGGAGG (
6
)
2.3
0.0023
P8 GC+1d culture
TGGCCCTGTG
(
10
)
1.1
0.0011
P8 GC+1d culture
TTGAGTTCGG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
GAAATAAAGT
(
6
)
11.7
0.0117
P8 GC+SHH+1d culture
GGCTGGGAGG (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
TTGAGTTCGG
(
2
)
1.2
0.0012
P1 cortex
AAGGAGGTGG (
7
)
4.5
0.0045
Hypothalamus
GAAATAAAGT
(
6
)
9.1
0.0091
Hypothalamus
TCACCGTGGT
(
4
)
1.8
0.0018
E12.5 retina
GAAATAAAGT
(
6
)
15
0.015
E12.5 retina
GGCTGGGAGG (
6
)
5.6
0.0056
E14.5 retina
GAAATAAAGT
(
6
)
5.5
0.0055
E14.5 retina
AAGGAGGTGG (
7
)
1.8
0.0018
E14.5 retina
AGGAGAGAAG (
3
)
1.8
0.0018
E14.5 retina
TCACCGTGGT
(
4
)
1.8
0.0018
E16.5 retina
GAAATAAAGT
(
6
)
9.1
0.0091
E16.5 retina
AAGGAGGTGG (
7
)
3.6
0.0036
E16.5 retina
TGGCCCTGTG
(
10
)
1.8
0.0018
E18.5 retina
GAAATAAAGT
(
6
)
12.7
0.0127
E18.5 retina
AGGAGAGAAG (
3
)
1.8
0.0018
P0.5 retina
AAGGAGGTGG (
7
)
7.9
0.0079
P0.5 retina
GGCTGGGAGG (
6
)
3.9
0.0039
P0.5 retina
GAAATAAAGT
(
6
)
2
0.002
P0.5 retina
TGGCCCTGTG
(
10
)
2
0.002
P2.5 retina
GAAATAAAGT
(
6
)
8.8
0.0088
P2.5 retina
TCACCGTGGT
(
4
)
3.5
0.0035
P2.5 retina
TTGAGTTCGG
(
2
)
1.8
0.0018
P4.5 retina
GAAATAAAGT
(
6
)
25.8
0.0258
P4.5 retina
TTGAGTTCGG
(
2
)
2
0.002
P6.5 retina
GAAATAAAGT
(
6
)
13.3
0.0133
P6.5 retina
GGCTGGGAGG (
6
)
1.7
0.0017
P10.5 crx- retina
GAAATAAAGT
(
6
)
18.6
0.0186
P10.5 crx- retina
TGGCCCTGTG
(
10
)
1.9
0.0019
P10.5 crx+ retina
GAAATAAAGT
(
6
)
17.3
0.0173
P10.5 crx+ retina
GGCTGGGAGG (
6
)
1.9
0.0019
P10.5 crx+ retina
TCACCGTGGT
(
4
)
1.9
0.0019
P10.5 crx+ retina
TTGAGTTCGG
(
2
)
1.9
0.0019
Adult retinal
GAAATAAAGT
(
6
)
9.3
0.0093
Adult retinal
TTGAGTTCGG
(
2
)
1.9
0.0019
ONL
GAAATAAAGT
(
6
)
9.6
0.0096
ONL
TTGAGTTCGG
(
2
)
3.8
0.0038
ONL
AAGGAGGTGG (
7
)
1.9
0.0019
