Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.334856	1700016A09Rik	RIKEN cDNA 1700016A09 gene	8		74227
Mm.334856	Gse1	genetic suppressor element 1	8		382034
Mm.334856	4833427B12Rik	RIKEN cDNA 4833427B12 gene	8		272551
Gene Ontology	DNA replication | nucleus
Human Homolog	Pfs2[DNA replication complex GINS protein PSF2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 90 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC TTAAAAAAAA (80) 13.1 0.0131 P8 Cb GC ATTTAGGAAG (4) 11.4 0.0114 P8 Cb GC CTGGGGCCTG (9) 1.6 0.0016 P8 Cb GC TTAAAAGGAA (8) 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma TTAAAAAAAA (80) 53.2 0.0532 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture TTAAAAAAAA (80) 28.5 0.0285 P8 GC+1d culture GAGATGGCCT (4) 4.6 0.0046 P8 GC+1d culture GGTCATCTGC (4) 2.3 0.0023 P8 GC+1d culture TTAAAAGGAA (8) 1.1 0.0011 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture TTAAAAAAAA (80) 34 0.034 P8 GC+SHH+1d culture GAGATGGCCT (4) 4.7 0.0047 P8 GC+SHH+1d culture GGTCATCTGC (4) 2.3 0.0023 P8 GC+SHH+1d culture AAGAATATTT (10) 1.2 0.0012 P8 GC+SHH+1d culture ATTTAGGAAG (4) 1.2 0.0012 P8 GC+SHH+1d culture TGGCTGAGGG (6) 1.2 0.0012 P8 GC+SHH+1d culture TTAAGAAAAA (11) 1.2 0.0012 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts TGGCTGAGGG (6) 7 0.007 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex CTGGGGCCTG (9) 4.9 0.0049 E15 cortex GAGATGGCCT (4) 4.9 0.0049 E15 cortex GAGGTGGGGT (7) 4.9 0.0049 E15 cortex TGGCTGAGGG (6) 4.9 0.0049 E15 cortex TTAAAAAAAA (80) 4.9 0.0049 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex TTAAAAAAAA (80) 13.6 0.0136 P1 cortex GGTCATCTGC (4) 4.5 0.0045 P1 cortex TTAAAAGGAA (8) 4.5 0.0045 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus TTAAAAAAAA (80) 19.9 0.0199 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina TTAAAAAAAA (80) 11.3 0.0113 E12.5 retina ATTTAGGAAG (4) 7.5 0.0075 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina TTAAAAAAAA (80) 16.4 0.0164 E14.5 retina ATTTAGGAAG (4) 3.6 0.0036 E14.5 retina TTAAAAGGAA (8) 1.8 0.0018 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina TTAAAAAAAA (80) 16.3 0.0163 E16.5 retina ATTTAGGAAG (4) 5.4 0.0054 E16.5 retina AAGAATATTT (10) 1.8 0.0018 E16.5 retina GAGATGGCCT (4) 1.8 0.0018 E16.5 retina TCTCCCACTC (4) 1.8 0.0018 E16.5 retina TTAAAAGGAA (8) 1.8 0.0018 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina TTAAAAAAAA (80) 50.9 0.0509 E18.5 retina AAGAATATTT (10) 3.6 0.0036 E18.5 retina CTGGGGCCTG (9) 1.8 0.0018 E18.5 retina TCTCCCACTC (4) 1.8 0.0018 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina TTAAAAAAAA (80) 17.7 0.0177 P0.5 retina TGGCTGAGGG (6) 2 0.002 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina TTAAAAAAAA (80) 40.5 0.0405 P2.5 retina GAGATGGCCT (4) 5.3 0.0053 P2.5 retina ATTTAGGAAG (4) 3.5 0.0035 P2.5 retina GGTCATCTGC (4) 1.8 0.0018 P2.5 retina TGGCTGAGGG (6) 1.8 0.0018 P2.5 retina TTAAGAAAAA (11) 1.8 0.0018 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina TTAAAAAAAA (80) 47.6 0.0476 P4.5 retina ATTTAGGAAG (4) 4 0.004 P4.5 retina TGGCTGAGGG (6) 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina TTAAAAAAAA (80) 16.7 0.0167 P6.5 retina GGTCATCTGC (4) 1.7 0.0017 P10.5 crx- retina TTAAAAAAAA (80) 13 0.013 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina AAGAATATTT (10) 1.9 0.0019 P10.5 crx- retina ATTTAGGAAG (4) 1.9 0.0019 P10.5 crx- retina GAGATGGCCT (4) 1.9 0.0019 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina TTAAAAAAAA (80) 5.8 0.0058 P10.5 crx+ retina TTAAAAGGAA (8) 1.9 0.0019 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal TTAAAAAAAA (80) 7.4 0.0074 Adult retinal GAGATGGCCT (4) 5.6 0.0056 Adult retinal AAGAATATTT (10) 1.9 0.0019 Adult retinal TCTCCCACTC (4) 1.9 0.0019 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL TTAAAAAAAA (80) 7.7 0.0077 ONL AAGAATATTT (10) 3.8 0.0038 ONL GAGGTGGGGT (7) 1.9 0.0019 ONL GGTCATCTGC (4) 1.9 0.0019 ONL TTAAAAGGAA (8) 1.9 0.0019 ONL TTAAGAAAAA (11) 1.9 0.0019