Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.33490	Syt13	synaptotagmin 13	2		80976
Gene Ontology	extracellular space | integral to plasma membrane | membrane | synaptic vesicle | transport | transporter activity | vesicle-mediated transport
Human Homolog	SYT13[synaptotagmin XIII]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 68 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATAGCTTTCT (8) 93 0.093 P8 Cb GC TGATTTCTTT (4) 1.6 0.0016 P8 Cb GC TGTCTGTCCA (5) 1.6 0.0016 Cb medulloblastoma ATAGCTTTCT (8) 166.5 0.1665 Cb medulloblastoma TCTGGTTACA 13.9 0.0139 Cb medulloblastoma AACCTCTGCC (3) 4.6 0.0046 Cb medulloblastoma CACCCCCAAG (4) 4.6 0.0046 Cb medulloblastoma TGATTTCTTT (4) 2.3 0.0023 Cb medulloblastoma TGTCTGTCCA (5) 2.3 0.0023 P8 GC+1d culture ATAGCTTTCT (8) 162.1 0.1621 P8 GC+1d culture TGATTTCTTT (4) 1.1 0.0011 P8 GC+SHH+1d culture ATAGCTTTCT (8) 118.3 0.1183 P8 GC+SHH+1d culture TCTGGTTACA 7 0.007 P8 GC+SHH+1d culture CACCCCCAAG (4) 5.9 0.0059 P8 GC+SHH+1d culture AACCTCTGCC (3) 1.2 0.0012 P8 GC+SHH+1d culture CGACTTTTTG 1.2 0.0012 P8 GC+SHH+1d culture TGATTTCTTT (4) 1.2 0.0012 3T3 fibroblasts CACCCCCAAG (4) 7 0.007 3T3 fibroblasts ATAGCTTTCT (8) 3.5 0.0035 E15 cortex ATAGCTTTCT (8) 9.9 0.0099 E15 cortex CACCCCCAAG (4) 9.9 0.0099 P1 cortex ATAGCTTTCT (8) 50 0.05 P1 cortex CACCCCCAAG (4) 4.5 0.0045 Hypothalamus ATAGCTTTCT (8) 101.4 0.1014 Hypothalamus TCTGGTTACA 5.4 0.0054 Hypothalamus AACCTCTGCC (3) 3.6 0.0036 Hypothalamus CCACACTGAT 3.6 0.0036 Hypothalamus TGTCTGTCCA (5) 3.6 0.0036 Hypothalamus CACCCCCAAG (4) 1.8 0.0018 E12.5 retina ATAGCTTTCT (8) 16.9 0.0169 E12.5 retina TCTGGTTACA 7.5 0.0075 E12.5 retina AACCTCTGCC (3) 1.9 0.0019 E12.5 retina CACCCCCAAG (4) 1.9 0.0019 E14.5 retina ATAGCTTTCT (8) 29.2 0.0292 E14.5 retina TGTCTGTCCA (5) 5.5 0.0055 E14.5 retina AACCTCTGCC (3) 1.8 0.0018 E14.5 retina CCACACTGAT 1.8 0.0018 E14.5 retina CGACTTTTTG 1.8 0.0018 E14.5 retina TCTGGTTACA 1.8 0.0018 E16.5 retina ATAGCTTTCT (8) 43.5 0.0435 E16.5 retina CGACTTTTTG 1.8 0.0018 E18.5 retina ATAGCTTTCT (8) 20 0.02 E18.5 retina CACCCCCAAG (4) 5.5 0.0055 E18.5 retina CGACTTTTTG 1.8 0.0018 E18.5 retina TCTGGTTACA 1.8 0.0018 P0.5 retina ATAGCTTTCT (8) 29.4 0.0294 P0.5 retina CACCCCCAAG (4) 7.9 0.0079 P0.5 retina AACCTCTGCC (3) 2 0.002 P2.5 retina ATAGCTTTCT (8) 38.7 0.0387 P2.5 retina CACCCCCAAG (4) 5.3 0.0053 P4.5 retina ATAGCTTTCT (8) 57.5 0.0575 P4.5 retina CACCCCCAAG (4) 4 0.004 P6.5 retina ATAGCTTTCT (8) 16.7 0.0167 P6.5 retina CACCCCCAAG (4) 5 0.005 P6.5 retina TCTGGTTACA 3.3 0.0033 P10.5 crx- retina ATAGCTTTCT (8) 44.6 0.0446 P10.5 crx- retina TGATTTCTTT (4) 5.6 0.0056 P10.5 crx- retina CACCCCCAAG (4) 3.7 0.0037 P10.5 crx- retina AACCTCTGCC (3) 1.9 0.0019 P10.5 crx+ retina ATAGCTTTCT (8) 40.4 0.0404 P10.5 crx+ retina AACCTCTGCC (3) 3.8 0.0038 P10.5 crx+ retina CACCCCCAAG (4) 1.9 0.0019 P10.5 crx+ retina TCTGGTTACA 1.9 0.0019 Adult retinal ATAGCTTTCT (8) 16.7 0.0167 Adult retinal AACCTCTGCC (3) 1.9 0.0019 Adult retinal CACCCCCAAG (4) 1.9 0.0019 ONL ATAGCTTTCT (8) 9.6 0.0096 ONL TCTGGTTACA 3.8 0.0038