Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.334955
9030420J04Rik
RIKEN cDNA 9030420J04 gene
9
71544
Human Homolog
FLJ32810[hypothetical protein FLJ32810]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 54 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTAAAAAAAA (
80
)
13.1
0.0131
P8 Cb GC
TTAATAAATC
3.3
0.0033
P8 Cb GC
CAGCCTGCCC
(
4
)
1.6
0.0016
P8 Cb GC
GATGGGAAAG (
10
)
1.6
0.0016
Cb medulloblastoma
TTAAAAAAAA (
80
)
53.2
0.0532
Cb medulloblastoma
GATGGGAAAG (
10
)
4.6
0.0046
Cb medulloblastoma
TTAATAAATC
2.3
0.0023
P8 GC+1d culture
TTAAAAAAAA (
80
)
28.5
0.0285
P8 GC+1d culture
GCTGTACAGA
(
4
)
2.3
0.0023
P8 GC+1d culture
TTAATAAATC
1.1
0.0011
P8 GC+SHH+1d culture
TTAAAAAAAA (
80
)
34
0.034
P8 GC+SHH+1d culture
TTTATAAAAA (
6
)
3.5
0.0035
P8 GC+SHH+1d culture
TTAATAAATC
1.2
0.0012
E15 cortex
CAGCCTGCCC
(
4
)
9.9
0.0099
E15 cortex
GATGGGAAAG (
10
)
4.9
0.0049
E15 cortex
TTAAAAAAAA (
80
)
4.9
0.0049
P1 cortex
TTAAAAAAAA (
80
)
13.6
0.0136
P1 cortex
GATGGGAAAG (
10
)
4.5
0.0045
Hypothalamus
TTAAAAAAAA (
80
)
19.9
0.0199
Hypothalamus
TTTATAAAAA (
6
)
1.8
0.0018
E12.5 retina
TTAAAAAAAA (
80
)
11.3
0.0113
E12.5 retina
GCTGTACAGA
(
4
)
1.9
0.0019
E14.5 retina
TTAAAAAAAA (
80
)
16.4
0.0164
E16.5 retina
TTAAAAAAAA (
80
)
16.3
0.0163
E16.5 retina
GCTGTACAGA
(
4
)
5.4
0.0054
E16.5 retina
CAGCCTGCCC
(
4
)
1.8
0.0018
E18.5 retina
TTAAAAAAAA (
80
)
50.9
0.0509
P0.5 retina
TTAAAAAAAA (
80
)
17.7
0.0177
P0.5 retina
GCTGTACAGA
(
4
)
3.9
0.0039
P0.5 retina
TTAATAAATC
2
0.002
P2.5 retina
TTAAAAAAAA (
80
)
40.5
0.0405
P2.5 retina
CAGCCTGCCC
(
4
)
1.8
0.0018
P2.5 retina
GATGGGAAAG (
10
)
1.8
0.0018
P2.5 retina
TTTATAAAAA (
6
)
1.8
0.0018
P4.5 retina
TTAAAAAAAA (
80
)
47.6
0.0476
P4.5 retina
TTAATAAATC
2
0.002
P6.5 retina
TTAAAAAAAA (
80
)
16.7
0.0167
P6.5 retina
GCTGTACAGA
(
4
)
3.3
0.0033
P6.5 retina
GATGGGAAAG (
10
)
1.7
0.0017
P6.5 retina
TTTATAAAAA (
6
)
1.7
0.0017
P10.5 crx- retina
TTAAAAAAAA (
80
)
13
0.013
P10.5 crx- retina
GAAGGTGTGC (
4
)
9.3
0.0093
P10.5 crx+ retina
GAAGGTGTGC (
4
)
15.4
0.0154
P10.5 crx+ retina
TTAAAAAAAA (
80
)
5.8
0.0058
P10.5 crx+ retina
GATGGGAAAG (
10
)
1.9
0.0019
P10.5 crx+ retina
GCTGTACAGA
(
4
)
1.9
0.0019
Adult retinal
GAAGGTGTGC (
4
)
109.2
0.1092
Adult retinal
TTAAAAAAAA (
80
)
7.4
0.0074
Adult retinal
CAGCCTGCCC
(
4
)
3.7
0.0037
Adult retinal
GCTGTACAGA
(
4
)
1.9
0.0019
ONL
GAAGGTGTGC (
4
)
172.4
0.1724
ONL
TTAAAAAAAA (
80
)
7.7
0.0077
ONL
TTTATAAAAA (
6
)
5.7
0.0057
ONL
GCTGTACAGA
(
4
)
1.9
0.0019
