Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.334999	Ckap4	cytoskeleton-associated protein 4	10		216197
Gene Ontology	biological_process unknown | cell surface | endoplasmic reticulum | protein binding
Human Homolog	CKAP4[cytoskeleton-associated protein 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TACCCTTGCC (3) 4.9 0.0049 P8 Cb GC AAAAGATCTA (11) 1.6 0.0016 P8 Cb GC TGCGTTTGGA (3) 1.6 0.0016 Cb medulloblastoma TACCCTTGCC (3) 2.3 0.0023 P8 GC+1d culture TACCCTTGCC (3) 12.6 0.0126 P8 GC+1d culture AAAAGATCTA (11) 1.1 0.0011 P8 GC+1d culture GAGAACAATT (2) 1.1 0.0011 P8 GC+SHH+1d culture TACCCTTGCC (3) 10.5 0.0105 P8 GC+SHH+1d culture GTGACCCCTC (3) 2.3 0.0023 P8 GC+SHH+1d culture GAGAACAATT (2) 1.2 0.0012 P8 GC+SHH+1d culture TGCGTTTGGA (3) 1.2 0.0012 3T3 fibroblasts TACCCTTGCC (3) 31.5 0.0315 3T3 fibroblasts AAAAGATCTA (11) 3.5 0.0035 P1 cortex TACCCTTGCC (3) 13.6 0.0136 P1 cortex AAAAGATTTA (4) 4.5 0.0045 Hypothalamus TACCCTTGCC (3) 1.8 0.0018 E12.5 retina TACCCTTGCC (3) 18.8 0.0188 E12.5 retina GAGGCCTGGA (5) 3.8 0.0038 E12.5 retina AAAAGATCTA (11) 1.9 0.0019 E12.5 retina GTGACCCCTC (3) 1.9 0.0019 E12.5 retina TTTTTTGAAT (2) 1.9 0.0019 E14.5 retina TACCCTTGCC (3) 12.8 0.0128 E14.5 retina AAAAGATCTA (11) 7.3 0.0073 E14.5 retina GTGACCCCTC (3) 1.8 0.0018 E16.5 retina TACCCTTGCC (3) 9.1 0.0091 E16.5 retina GAAAGTAGCA 3.6 0.0036 E16.5 retina AAAAGATTTA (4) 1.8 0.0018 E16.5 retina GAGAACAATT (2) 1.8 0.0018 E18.5 retina TACCCTTGCC (3) 7.3 0.0073 E18.5 retina GAAAGTAGCA 1.8 0.0018 P0.5 retina TACCCTTGCC (3) 9.8 0.0098 P0.5 retina TTTTTTGAAT (2) 2 0.002 P2.5 retina TACCCTTGCC (3) 7 0.007 P2.5 retina AAAAGATTTA (4) 1.8 0.0018 P2.5 retina GAAAGTAGCA 1.8 0.0018 P2.5 retina GTGACCCCTC (3) 1.8 0.0018 P4.5 retina TACCCTTGCC (3) 5.9 0.0059 P6.5 retina TACCCTTGCC (3) 8.3 0.0083 P6.5 retina GTGACCCCTC (3) 1.7 0.0017 P10.5 crx- retina TACCCTTGCC (3) 13 0.013 P10.5 crx- retina GAGGCCTGGA (5) 3.7 0.0037 P10.5 crx- retina AAAAGATCTA (11) 1.9 0.0019 P10.5 crx- retina GTGACCCCTC (3) 1.9 0.0019 P10.5 crx+ retina TACCCTTGCC (3) 9.6 0.0096 P10.5 crx+ retina GAGAACAATT (2) 1.9 0.0019 P10.5 crx+ retina GAGGCCTGGA (5) 1.9 0.0019 P10.5 crx+ retina TGCGTTTGGA (3) 1.9 0.0019 Adult retinal AAAAGATTTA (4) 1.9 0.0019 ONL GTGACCCCTC (3) 1.9 0.0019