Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.335187
Sema7a
sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A
9
20361
Mm.335187
R75110
expressed sequence R75110
9
97576
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 51 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAGAACCCAC (
4
)
62
0.062
P8 Cb GC
AAATAAAACA (
10
)
17.9
0.0179
P8 Cb GC
TCCTAACTTA
(
3
)
6.5
0.0065
Cb medulloblastoma
AAATAAAACA (
10
)
39.3
0.0393
Cb medulloblastoma
CAGAACCCAC (
4
)
30.1
0.0301
Cb medulloblastoma
TCCTAACTTA
(
3
)
2.3
0.0023
P8 GC+1d culture
CAGAACCCAC (
4
)
44.5
0.0445
P8 GC+1d culture
AAATAAAACA (
10
)
13.7
0.0137
P8 GC+1d culture
TCCTAACTTA
(
3
)
11.4
0.0114
P8 GC+SHH+1d culture
CAGAACCCAC (
4
)
50.3
0.0503
P8 GC+SHH+1d culture
AAATAAAACA (
10
)
29.3
0.0293
P8 GC+SHH+1d culture
TCCTAACTTA
(
3
)
10.5
0.0105
3T3 fibroblasts
CAGAACCCAC (
4
)
203.3
0.2033
E15 cortex
CAGAACCCAC (
4
)
69.3
0.0693
E15 cortex
TCCTAACTTA
(
3
)
9.9
0.0099
E15 cortex
AAATAAAACA (
10
)
4.9
0.0049
P1 cortex
CAGAACCCAC (
4
)
13.6
0.0136
P1 cortex
AAATAAAACA (
10
)
9.1
0.0091
P1 cortex
TCCTAACTTA
(
3
)
9.1
0.0091
Hypothalamus
AAATAAAACA (
10
)
48.9
0.0489
Hypothalamus
CAGAACCCAC (
4
)
9.1
0.0091
E12.5 retina
CAGAACCCAC (
4
)
56.3
0.0563
E12.5 retina
AAATAAAACA (
10
)
24.4
0.0244
E12.5 retina
TCCTAACTTA
(
3
)
1.9
0.0019
E14.5 retina
AAATAAAACA (
10
)
34.6
0.0346
E14.5 retina
CAGAACCCAC (
4
)
20
0.02
E16.5 retina
AAATAAAACA (
10
)
29
0.029
E16.5 retina
CAGAACCCAC (
4
)
19.9
0.0199
E16.5 retina
TCCTAACTTA
(
3
)
3.6
0.0036
E18.5 retina
AAATAAAACA (
10
)
52.8
0.0528
E18.5 retina
CAGAACCCAC (
4
)
16.4
0.0164
P0.5 retina
CAGAACCCAC (
4
)
80.5
0.0805
P0.5 retina
AAATAAAACA (
10
)
7.9
0.0079
P2.5 retina
CAGAACCCAC (
4
)
17.6
0.0176
P2.5 retina
AAATAAAACA (
10
)
15.8
0.0158
P2.5 retina
TCCTAACTTA
(
3
)
1.8
0.0018
P4.5 retina
AAATAAAACA (
10
)
25.8
0.0258
P4.5 retina
CAGAACCCAC (
4
)
25.8
0.0258
P6.5 retina
AAATAAAACA (
10
)
41.7
0.0417
P6.5 retina
CAGAACCCAC (
4
)
25
0.025
P10.5 crx- retina
CAGAACCCAC (
4
)
35.3
0.0353
P10.5 crx- retina
AAATAAAACA (
10
)
26
0.026
P10.5 crx- retina
TCCTAACTTA
(
3
)
5.6
0.0056
P10.5 crx+ retina
CAGAACCCAC (
4
)
44.2
0.0442
P10.5 crx+ retina
AAATAAAACA (
10
)
21.1
0.0211
P10.5 crx+ retina
TCCTAACTTA
(
3
)
3.8
0.0038
Adult retinal
CAGAACCCAC (
4
)
22.2
0.0222
Adult retinal
AAATAAAACA (
10
)
3.7
0.0037
ONL
AAATAAAACA (
10
)
32.6
0.0326
ONL
CAGAACCCAC (
4
)
13.4
0.0134
ONL
TCCTAACTTA
(
3
)
5.7
0.0057
