Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.335350	Zic1	zinc finger protein of the cerebellum 1	9	9 61.0 cM	22771
Gene Ontology	behavior | central nervous system development | central nervous system development | development | DNA binding | neurogenesis | nucleic acid binding | nucleus | zinc ion binding
Human Homolog	ZIC1[Zic family member 1 (odd-paired homolog, Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTACAGCTAT (2) 101.1 0.1011 P8 Cb GC ATTTGCGCCT 9.8 0.0098 P8 Cb GC TCCTGTCAAG 9.8 0.0098 P8 Cb GC AATGTGAACA (5) 6.5 0.0065 P8 Cb GC TGTTTCACAG (5) 4.9 0.0049 P8 Cb GC CACGAGCTGG (3) 3.3 0.0033 P8 Cb GC CGGATAAATA 3.3 0.0033 P8 Cb GC TATTTCAAAA (14) 3.3 0.0033 Cb medulloblastoma TTACAGCTAT (2) 32.4 0.0324 Cb medulloblastoma TATTTCAAAA (14) 4.6 0.0046 Cb medulloblastoma AATGTGAACA (5) 2.3 0.0023 Cb medulloblastoma ATTTGCGCCT 2.3 0.0023 Cb medulloblastoma CGGATAAATA 2.3 0.0023 Cb medulloblastoma TATTTCTAAA (3) 2.3 0.0023 Cb medulloblastoma TCCTGTCAAG 2.3 0.0023 P8 GC+1d culture TTACAGCTAT (2) 123.3 0.1233 P8 GC+1d culture AATGTGAACA (5) 17.1 0.0171 P8 GC+1d culture TCCTGTCAAG 8 0.008 P8 GC+1d culture ATTTGCGCCT 5.7 0.0057 P8 GC+1d culture CACGAGCTGG (3) 2.3 0.0023 P8 GC+1d culture TATTTCAAAA (14) 2.3 0.0023 P8 GC+1d culture TGTTTCACAG (5) 2.3 0.0023 P8 GC+1d culture TATTTCTAAA (3) 1.1 0.0011 P8 GC+SHH+1d culture TTACAGCTAT (2) 87.8 0.0878 P8 GC+SHH+1d culture ATTTGCGCCT 8.2 0.0082 P8 GC+SHH+1d culture AATGTGAACA (5) 7 0.007 P8 GC+SHH+1d culture TCCTGTCAAG 5.9 0.0059 P8 GC+SHH+1d culture CACGAGCTGG (3) 4.7 0.0047 P8 GC+SHH+1d culture TATTTCAAAA (14) 2.3 0.0023 P8 GC+SHH+1d culture TATTTCTAAA (3) 2.3 0.0023 P8 GC+SHH+1d culture CGGATAAATA 1.2 0.0012 P8 GC+SHH+1d culture TGTTTCACAG (5) 1.2 0.0012 E15 cortex TATTTCTAAA (3) 4.9 0.0049 Hypothalamus TTACAGCTAT (2) 7.2 0.0072 Hypothalamus TATTTCAAAA (14) 3.6 0.0036 Hypothalamus AATGTGAACA (5) 1.8 0.0018 Hypothalamus TATTTCTAAA (3) 1.8 0.0018 Hypothalamus TCCTGTCAAG 1.8 0.0018 E12.5 retina TTACAGCTAT (2) 5.6 0.0056 E12.5 retina ATTTGCGCCT 3.8 0.0038 E12.5 retina AATGTGAACA (5) 1.9 0.0019 E14.5 retina TTACAGCTAT (2) 7.3 0.0073 E14.5 retina TATTTCAAAA (14) 5.5 0.0055 E16.5 retina TTACAGCTAT (2) 3.6 0.0036 E16.5 retina TATTTCAAAA (14) 1.8 0.0018 E16.5 retina TATTTCTAAA (3) 1.8 0.0018 E16.5 retina TCCTGTCAAG 1.8 0.0018 E18.5 retina TATTTCAAAA (14) 1.8 0.0018 P0.5 retina TTACAGCTAT (2) 2 0.002 P2.5 retina TATTTCAAAA (14) 3.5 0.0035 P4.5 retina TTACAGCTAT (2) 4 0.004 P4.5 retina TATTTCAAAA (14) 2 0.002 P6.5 retina CACGAGCTGG (3) 1.7 0.0017 P6.5 retina TATTTCAAAA (14) 1.7 0.0017 P6.5 retina TATTTCTAAA (3) 1.7 0.0017 P10.5 crx+ retina TATTTCAAAA (14) 1.9 0.0019 P10.5 crx+ retina TATTTCTAAA (3) 1.9 0.0019 Adult retinal TATTTCAAAA (14) 1.9 0.0019 ONL TATTTCAAAA (14) 1.9 0.0019