Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.335385
Pccb
propionyl Coenzyme A carboxylase, beta polypeptide
9
66904
Mm.335385
6720484G13Rik
RIKEN cDNA 6720484G13 gene
9
77696
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 74 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGCTCAGGTG (
4
)
4.9
0.0049
P8 Cb GC
GTGTGATACA
(
2
)
4.9
0.0049
P8 Cb GC
CGGGCTCCAC
(
3
)
3.3
0.0033
P8 Cb GC
GGACAGCACA (
7
)
1.6
0.0016
P8 Cb GC
GGGTGGGGGA
(
14
)
1.6
0.0016
Cb medulloblastoma
GGCTCAGGTG (
4
)
2.3
0.0023
Cb medulloblastoma
GGTGCTGGGA (
14
)
2.3
0.0023
Cb medulloblastoma
GTGAGGACAC (
4
)
2.3
0.0023
P8 GC+1d culture
GTGAGGACAC (
4
)
3.4
0.0034
P8 GC+1d culture
CGGGCTCCAC
(
3
)
2.3
0.0023
P8 GC+1d culture
GGACAGCACA (
7
)
2.3
0.0023
P8 GC+1d culture
GGCTCAGGTG (
4
)
2.3
0.0023
P8 GC+1d culture
GTGTGATACA
(
2
)
2.3
0.0023
P8 GC+1d culture
AAAAAATGGA
(
8
)
1.1
0.0011
P8 GC+1d culture
TCAAAAAAGA (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
CGGGCTCCAC
(
3
)
7
0.007
P8 GC+SHH+1d culture
GGCTCAGGTG (
4
)
4.7
0.0047
P8 GC+SHH+1d culture
GGGTGGGGGA
(
14
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGAGGACAC (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TCAAAAAAGA (
3
)
1.2
0.0012
3T3 fibroblasts
GTGAGGACAC (
4
)
7
0.007
3T3 fibroblasts
GGACAGCACA (
7
)
3.5
0.0035
E15 cortex
CGGGCTCCAC
(
3
)
9.9
0.0099
E15 cortex
GGCCCGTGTG
(
2
)
9.9
0.0099
E15 cortex
GGACAGCACA (
7
)
4.9
0.0049
E15 cortex
GGTGCTGGGA (
14
)
4.9
0.0049
P1 cortex
GGCCCGTGTG
(
2
)
9.1
0.0091
P1 cortex
CGGGCTCCAC
(
3
)
4.5
0.0045
P1 cortex
GGGTGGGGGA
(
14
)
4.5
0.0045
Hypothalamus
GGGTGGGGGA
(
14
)
9.1
0.0091
Hypothalamus
CGGGCTCCAC
(
3
)
3.6
0.0036
Hypothalamus
GGTGCTGGGA (
14
)
3.6
0.0036
Hypothalamus
GGCTCAGGTG (
4
)
1.8
0.0018
E12.5 retina
GGCTCAGGTG (
4
)
3.8
0.0038
E12.5 retina
AAAAAATGGA
(
8
)
1.9
0.0019
E12.5 retina
CGGGCTCCAC
(
3
)
1.9
0.0019
E12.5 retina
GGGTGGGGGA
(
14
)
1.9
0.0019
E12.5 retina
GGTGCTGGGA (
14
)
1.9
0.0019
E14.5 retina
TCAAAAAAGA (
3
)
3.6
0.0036
E14.5 retina
AAAAAATGGA
(
8
)
1.8
0.0018
E14.5 retina
GGTGCTGGGA (
14
)
1.8
0.0018
E16.5 retina
AAAAAATGGA
(
8
)
1.8
0.0018
E16.5 retina
CGGGCTCCAC
(
3
)
1.8
0.0018
E16.5 retina
GGACAGCACA (
7
)
1.8
0.0018
E16.5 retina
GGCCCGTGTG
(
2
)
1.8
0.0018
E16.5 retina
TCAAAAAAGA (
3
)
1.8
0.0018
E18.5 retina
CGGGCTCCAC
(
3
)
1.8
0.0018
E18.5 retina
GGGTGGGGGA
(
14
)
1.8
0.0018
P0.5 retina
GGTGCTGGGA (
14
)
3.9
0.0039
P0.5 retina
CACACAACAA
(
3
)
2
0.002
P0.5 retina
CGGGCTCCAC
(
3
)
2
0.002
P0.5 retina
GGCTCAGGTG (
4
)
2
0.002
P0.5 retina
GTGAGGACAC (
4
)
2
0.002
P2.5 retina
GGCTCAGGTG (
4
)
1.8
0.0018
P2.5 retina
GGTGCTGGGA (
14
)
1.8
0.0018
P4.5 retina
CGGGCTCCAC
(
3
)
5.9
0.0059
P4.5 retina
GGGTGGGGGA
(
14
)
2
0.002
P6.5 retina
CACACAACAA
(
3
)
5
0.005
P6.5 retina
CGGGCTCCAC
(
3
)
5
0.005
P6.5 retina
GGCTCAGGTG (
4
)
5
0.005
P6.5 retina
GGGTGGGGGA
(
14
)
3.3
0.0033
P6.5 retina
GGTGCTGGGA (
14
)
3.3
0.0033
P6.5 retina
GTGAGGACAC (
4
)
3.3
0.0033
P6.5 retina
AAAAAATGGA
(
8
)
1.7
0.0017
P6.5 retina
TCAAAAAAGA (
3
)
1.7
0.0017
P10.5 crx- retina
CGGGCTCCAC
(
3
)
9.3
0.0093
P10.5 crx- retina
GGGTGGGGGA
(
14
)
5.6
0.0056
P10.5 crx+ retina
CGGGCTCCAC
(
3
)
9.6
0.0096
P10.5 crx+ retina
GGGTGGGGGA
(
14
)
1.9
0.0019
P10.5 crx+ retina
GGTGCTGGGA (
14
)
1.9
0.0019
P10.5 crx+ retina
GTGAGGACAC (
4
)
1.9
0.0019
Adult retinal
GGTGCTGGGA (
14
)
5.6
0.0056
Adult retinal
GGGTGGGGGA
(
14
)
3.7
0.0037
ONL
GGTGCTGGGA (
14
)
5.7
0.0057