Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.336394	Rab3ip	RAB3A interacting protein	10	10 62.0 cM	216363
Mm.336394	4933412E12Rik	RIKEN cDNA 4933412E12 gene	10		71086
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC ATTCCGAATT (107) 1.6 0.0016 P8 Cb GC TTTAACATTT (4) 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma TTTAACATTT (4) 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture ACAGCTTTTG (4) 3.4 0.0034 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture TTTAACATTT (4) 1.2 0.0012 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 P1 cortex TAAAAAAAAA (196) 50 0.05 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina ACAGCTTTTG (4) 1.8 0.0018 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina ACAGCTTTTG (4) 1.8 0.0018 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina ATTCCGAATT (107) 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina ATTCCGAATT (107) 3.3 0.0033 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina ACAGCTTTTG (4) 3.7 0.0037 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina ACAGCTTTTG (4) 1.9 0.0019 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal ACAGCTTTTG (4) 3.7 0.0037 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL ATTCCGAATT (107) 3.8 0.0038 ONL TTTAACATTT (4) 1.9 0.0019