Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.337074	Myl6	myosin, light polypeptide 6, alkali, smooth muscle and non-muscle	10		17904
Gene Ontology	calcium ion binding | cytoskeleton | cytoskeleton organization and biogenesis | muscle development | myosin
Human Homolog	MLC1SA[myosin light chain 1 slow a]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 128 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGCGGAGCT (7) 19.6 0.0196 P8 Cb GC AGGACAGCAA (2) 9.8 0.0098 P8 Cb GC TGCCATTATA 4.9 0.0049 P8 Cb GC GTCGGCCGCC (25) 3.3 0.0033 P8 Cb GC AAGGACAGCA (5) 1.6 0.0016 P8 Cb GC CTGCAGACCG (3) 1.6 0.0016 P8 Cb GC GGAGGGAAGG (9) 1.6 0.0016 P8 Cb GC GGCAGGAAGT (3) 1.6 0.0016 Cb medulloblastoma GGGCGGAGCT (7) 23.1 0.0231 Cb medulloblastoma AGGACAGCAA (2) 9.2 0.0092 Cb medulloblastoma AAGGTGGGAG (4) 2.3 0.0023 Cb medulloblastoma ACGGTGCCAT (4) 2.3 0.0023 Cb medulloblastoma GAGACAGCAA (5) 2.3 0.0023 Cb medulloblastoma GGCAGGAAGT (3) 2.3 0.0023 P8 GC+1d culture GGGCGGAGCT (7) 78.8 0.0788 P8 GC+1d culture AGGACAGCAA (2) 25.1 0.0251 P8 GC+1d culture ACGGTGCCAT (4) 5.7 0.0057 P8 GC+1d culture GGCAGGAAGT (3) 5.7 0.0057 P8 GC+1d culture GGTACCCCTC (3) 3.4 0.0034 P8 GC+1d culture CTGCAGACCG (3) 2.3 0.0023 P8 GC+1d culture TGCCATTATA 2.3 0.0023 P8 GC+1d culture AAGGTGGGAG (4) 1.1 0.0011 P8 GC+1d culture GGGCGGAGTT (2) 1.1 0.0011 P8 GC+1d culture GTCGGCCGCC (25) 1.1 0.0011 P8 GC+SHH+1d culture GGGCGGAGCT (7) 65.6 0.0656 P8 GC+SHH+1d culture AGGACAGCAA (2) 17.6 0.0176 P8 GC+SHH+1d culture GGCAGGAAGT (3) 4.7 0.0047 P8 GC+SHH+1d culture GTCGGCCGCC (25) 4.7 0.0047 P8 GC+SHH+1d culture CCCCGCCACT 2.3 0.0023 P8 GC+SHH+1d culture GGTACCCCTC (3) 2.3 0.0023 P8 GC+SHH+1d culture TCCTCCAATT (5) 2.3 0.0023 P8 GC+SHH+1d culture ACGGTGCCAT (4) 1.2 0.0012 P8 GC+SHH+1d culture CTGCAGACCG (3) 1.2 0.0012 P8 GC+SHH+1d culture GGGCGGAGTT (2) 1.2 0.0012 P8 GC+SHH+1d culture GTTCCCCTCC (5) 1.2 0.0012 P8 GC+SHH+1d culture TGCCATTATA 1.2 0.0012 3T3 fibroblasts GGGCGGAGCT (7) 94.6 0.0946 3T3 fibroblasts AGGACAGCAA (2) 28 0.028 3T3 fibroblasts GGCAGGAAGT (3) 17.5 0.0175 3T3 fibroblasts GGGCGGACTT (2) 14 0.014 3T3 fibroblasts ACGGTGCCAT (4) 3.5 0.0035 3T3 fibroblasts GGGCGGAGTT (2) 3.5 0.0035 3T3 fibroblasts GGTACCCCTC (3) 3.5 0.0035 3T3 fibroblasts GTCGGCCGCC (25) 3.5 0.0035 E15 cortex AAGGTGGGAG (4) 4.9 0.0049 E15 cortex AGGACAGCAA (2) 4.9 0.0049 E15 cortex GGGCGGAGCT (7) 4.9 0.0049 P1 cortex AGGACAGCAA (2) 9.1 0.0091 P1 cortex AAGGACAGCA (5) 4.5 0.0045 Hypothalamus GGGCGGAGCT (7) 39.8 0.0398 Hypothalamus AGGACAGCAA (2) 23.5 0.0235 Hypothalamus CTGCAGACCG (3) 5.4 0.0054 Hypothalamus GGCAGGAAGT (3) 3.6 0.0036 Hypothalamus ACGGTGCCAT (4) 1.8 0.0018 Hypothalamus GTCGGCCGCC (25) 1.8 0.0018 Hypothalamus TGCCATTATA 1.8 0.0018 E12.5 retina GGGCGGAGCT (7) 43.2 0.0432 E12.5 retina AGGACAGCAA (2) 15 0.015 E12.5 retina CCCCGCCACT 3.8 0.0038 E12.5 retina TGCCATTATA 3.8 0.0038 E12.5 retina AAGGACAGCA (5) 1.9 0.0019 E12.5 retina GGCAGGAAGT (3) 1.9 0.0019 E12.5 retina GGTACCCCTC (3) 1.9 0.0019 E12.5 retina GTCGGCCGCC (25) 1.9 0.0019 E14.5 retina GGGCGGAGCT (7) 21.9 0.0219 E14.5 retina AGGACAGCAA (2) 7.3 0.0073 E14.5 retina ACGGTGCCAT (4) 3.6 0.0036 E14.5 retina CCCCGCCACT 3.6 0.0036 E14.5 retina GTCGGCCGCC (25) 3.6 0.0036 E14.5 retina TGCCATTATA 3.6 0.0036 E14.5 retina GAGACAGCAA (5) 1.8 0.0018 E14.5 retina GGTACCCCTC (3) 1.8 0.0018 E16.5 retina GGGCGGAGCT (7) 16.3 0.0163 E16.5 retina AGGACAGCAA (2) 10.9 0.0109 E16.5 retina ACGGTGCCAT (4) 3.6 0.0036 E16.5 retina CCCCGCCACT 3.6 0.0036 E16.5 retina CTGCAGACCG (3) 1.8 0.0018 E16.5 retina GGCAGGAAGT (3) 1.8 0.0018 E16.5 retina GGTACCCCTC (3) 1.8 0.0018 E18.5 retina GGGCGGAGCT (7) 38.2 0.0382 E18.5 retina AGGACAGCAA (2) 7.3 0.0073 E18.5 retina GGGCGGACTT (2) 1.8 0.0018 E18.5 retina GGTACCCCTC (3) 1.8 0.0018 P0.5 retina GGGCGGAGCT (7) 41.2 0.0412 P0.5 retina AGGACAGCAA (2) 15.7 0.0157 P0.5 retina GTCGGCCGCC (25) 5.9 0.0059 P0.5 retina TCCTCCAATT (5) 3.9 0.0039 P0.5 retina AAGGTGGGAG (4) 2 0.002 P0.5 retina ACGGTGCCAT (4) 2 0.002 P0.5 retina GGAGGGAAGG (9) 2 0.002 P0.5 retina GTTCCCCTCC (5) 2 0.002 P2.5 retina GGGCGGAGCT (7) 52.8 0.0528 P2.5 retina AGGACAGCAA (2) 7 0.007 P2.5 retina GTCGGCCGCC (25) 3.5 0.0035 P2.5 retina TGCCATTATA 3.5 0.0035 P2.5 retina GAGACAGCAA (5) 1.8 0.0018 P2.5 retina GGAGGGAAGG (9) 1.8 0.0018 P2.5 retina GGTACCCCTC (3) 1.8 0.0018 P4.5 retina GGGCGGAGCT (7) 25.8 0.0258 P4.5 retina AGGACAGCAA (2) 5.9 0.0059 P4.5 retina CCCCGCCACT 2 0.002 P4.5 retina GGTACCCCTC (3) 2 0.002 P4.5 retina GTCGGCCGCC (25) 2 0.002 P4.5 retina GTTCCCCTCC (5) 2 0.002 P6.5 retina GGGCGGAGCT (7) 36.7 0.0367 P6.5 retina AGGACAGCAA (2) 5 0.005 P6.5 retina GGTACCCCTC (3) 1.7 0.0017 P10.5 crx- retina GGGCGGAGCT (7) 20.4 0.0204 P10.5 crx- retina AGGACAGCAA (2) 18.6 0.0186 P10.5 crx- retina GTCGGCCGCC (25) 3.7 0.0037 P10.5 crx- retina ACGGTGCCAT (4) 1.9 0.0019 P10.5 crx- retina GGTACCCCTC (3) 1.9 0.0019 P10.5 crx+ retina GGGCGGAGCT (7) 32.7 0.0327 P10.5 crx+ retina AGGACAGCAA (2) 9.6 0.0096 P10.5 crx+ retina GTCGGCCGCC (25) 3.8 0.0038 P10.5 crx+ retina ACGGTGCCAT (4) 1.9 0.0019 Adult retinal GGGCGGAGCT (7) 18.5 0.0185 Adult retinal AGGACAGCAA (2) 5.6 0.0056 Adult retinal GGCAGGAAGT (3) 3.7 0.0037 Adult retinal ACGGTGCCAT (4) 1.9 0.0019 Adult retinal CCCCGCCACT 1.9 0.0019 Adult retinal GGAGGGAAGG (9) 1.9 0.0019 Adult retinal GGTACCCCTC (3) 1.9 0.0019 Adult retinal GTCGGCCGCC (25) 1.9 0.0019 Adult retinal TGCCATTATA 1.9 0.0019 ONL GGGCGGAGCT (7) 11.5 0.0115 ONL AGGACAGCAA (2) 1.9 0.0019 ONL GGAGGGAAGG (9) 1.9 0.0019