Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.33765	Arfgap1	ADP-ribosylation factor GTPase activating protein 1	2	2 104.0 cM	228998
Gene Ontology	Golgi apparatus | GTPase activator activity | protein transport | regulation of GTPase activity | transport
Human Homolog	ARFGAP1[ADP-ribosylation factor GTPase activating protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC CCTTTTCCTT (3) 14.7 0.0147 P8 Cb GC ACCTGAAAAA 1.6 0.0016 P8 Cb GC TTTGCTCCTA 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma CCTTTTCCTT (3) 18.5 0.0185 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture CCTTTTCCTT (3) 9.1 0.0091 P8 GC+1d culture ACCTGAAAAA 2.3 0.0023 P8 GC+1d culture TTTGCTCCTA 2.3 0.0023 P8 GC+1d culture TGTTACAGTG (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture CCTTTTCCTT (3) 9.4 0.0094 P8 GC+SHH+1d culture CCTTCCATTA (3) 3.5 0.0035 P8 GC+SHH+1d culture TTTGCTCCTA 2.3 0.0023 P8 GC+SHH+1d culture ACCTGAAGTT (2) 1.2 0.0012 P8 GC+SHH+1d culture TCTGGCTCTG (6) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts TCTGGCTCTG (6) 3.5 0.0035 3T3 fibroblasts TGGATTTTGT (3) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CCTTTTCCTT (3) 19.8 0.0198 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex CCTTTTCCTT (3) 22.7 0.0227 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus CCTTTTCCTT (3) 9.1 0.0091 Hypothalamus ACCTGAAAAA 1.8 0.0018 Hypothalamus ACCTGAAGTT (2) 1.8 0.0018 Hypothalamus TGGATTTTGT (3) 1.8 0.0018 Hypothalamus TGTTACAGTG (2) 1.8 0.0018 Hypothalamus TTTGCTCCTA 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina CCTTTTCCTT (3) 16.9 0.0169 E12.5 retina ACCTGAAAAA 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina CCTTTTCCTT (3) 12.8 0.0128 E14.5 retina ACCTGAAAAA 1.8 0.0018 E14.5 retina TGGATTTTGT (3) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina CCTTTTCCTT (3) 23.5 0.0235 E16.5 retina ACCTGAAAAA 7.2 0.0072 E16.5 retina ACCTGAAGTT (2) 1.8 0.0018 E16.5 retina TGTTACAGTG (2) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina ACCTGAAAAA 9.1 0.0091 E18.5 retina CCTTTTCCTT (3) 9.1 0.0091 E18.5 retina ACCTGAAGTT (2) 1.8 0.0018 E18.5 retina TGTTACAGTG (2) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina CCTTTTCCTT (3) 9.8 0.0098 P0.5 retina ACCTGAAAAA 3.9 0.0039 P0.5 retina TCTGGCTCTG (6) 2 0.002 P0.5 retina TTTGCTCCTA 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina CCTTTTCCTT (3) 14.1 0.0141 P2.5 retina TTTGCTCCTA 3.5 0.0035 P2.5 retina ACCTGAAAAA 1.8 0.0018 P2.5 retina CTCAGGTTCC (3) 1.8 0.0018 P2.5 retina TGTTACAGTG (2) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina CCTTTTCCTT (3) 13.9 0.0139 P4.5 retina TGGATTTTGT (3) 5.9 0.0059 P4.5 retina ACCTGAAGTT (2) 4 0.004 P4.5 retina CTCAGGTTCC (3) 2 0.002 P4.5 retina TTTGCTCCTA 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina ACCTGAAAAA 10 0.01 P6.5 retina CCTTTTCCTT (3) 6.7 0.0067 P6.5 retina ACCTGAAGTT (2) 1.7 0.0017 P6.5 retina TTTGCTCCTA 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CCTTTTCCTT (3) 26 0.026 P10.5 crx- retina TTTGCTCCTA 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina CCTTTTCCTT (3) 7.7 0.0077 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal CCTTTTCCTT (3) 20.4 0.0204 Adult retinal ACCTGAAGTT (2) 1.9 0.0019 Adult retinal CTCAGGTTCC (3) 1.9 0.0019 Adult retinal TTTGCTCCTA 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL CCTTTTCCTT (3) 13.4 0.0134 ONL ACCTGAAAAA 5.7 0.0057 ONL TTTGCTCCTA 1.9 0.0019