Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.338720	Npm1	nucleophosmin 1	11		18148
Mm.338720	Gja1	gap junction membrane channel protein alpha 1	10	10 29.0 cM	14609
Gene Ontology	cell communication | cell-cell signaling | connexon channel activity | connexon complex | embryonic heart tube development | gap junction | gap-junction forming channel activity | integral to membrane | regulation of heart rate
Human Homolog	GJA1[gap junction protein, alpha 1, 43kDa (connexin 43)] | GJA1[gap junction protein, alpha 1, 43kDa (connexin 43)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 30 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTAACCTT (5) 14.7 0.0147 P8 Cb GC GAGAATCTCT (4) 1.6 0.0016 P8 Cb GC TCTGGAAAGC (3) 1.6 0.0016 P8 GC+1d culture TTTTAACCTT (5) 4.6 0.0046 P8 GC+1d culture TCTGGAAAGC (3) 3.4 0.0034 P8 GC+SHH+1d culture TTTTAACCTT (5) 10.5 0.0105 3T3 fibroblasts TCTGGAAAGC (3) 10.5 0.0105 3T3 fibroblasts TTTTAACCTT (5) 3.5 0.0035 E15 cortex TCTGGAAAGC (3) 14.8 0.0148 Hypothalamus TTTTAACCTT (5) 1.8 0.0018 E12.5 retina TTTTAACCTT (5) 11.3 0.0113 E12.5 retina GAGAATCTCT (4) 1.9 0.0019 E12.5 retina TCTGGAAAGC (3) 1.9 0.0019 E14.5 retina TTTTAACCTT (5) 14.6 0.0146 E16.5 retina TTTTAACCTT (5) 10.9 0.0109 E16.5 retina TCTGGAAAGC (3) 3.6 0.0036 E16.5 retina GAGAATCTCT (4) 1.8 0.0018 E16.5 retina TATAAATATT (8) 1.8 0.0018 E18.5 retina TTTTAACCTT (5) 16.4 0.0164 P0.5 retina TTTTAACCTT (5) 7.9 0.0079 P0.5 retina TCTGGAAAGC (3) 2 0.002 P2.5 retina TTTTAACCTT (5) 5.3 0.0053 P4.5 retina TATAAATATT (8) 2 0.002 P4.5 retina TTTTAACCTT (5) 2 0.002 P6.5 retina TTTTAACCTT (5) 6.7 0.0067 P6.5 retina GAGAATCTCT (4) 1.7 0.0017 P10.5 crx- retina TATAAATATT (8) 1.9 0.0019 P10.5 crx- retina TTTTAACCTT (5) 1.9 0.0019 P10.5 crx+ retina TTTTAACCTT (5) 1.9 0.0019 Adult retinal TCTGGAAAGC (3) 1.9 0.0019