Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.33881
1300010M03Rik
RIKEN cDNA 1300010M03 gene
11
67998
Human Homolog
LOC162427[hypothetical protein LOC162427]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATTCTGCACT (
6
)
6.5
0.0065
P8 Cb GC
ATAGGGAGAG (
4
)
1.6
0.0016
P8 Cb GC
CTTTGGGAGT
(
2
)
1.6
0.0016
Cb medulloblastoma
ATTCTGCACT (
6
)
2.3
0.0023
Cb medulloblastoma
CTTTGGGAGT
(
2
)
2.3
0.0023
P8 GC+1d culture
ATTCTGCACT (
6
)
5.7
0.0057
P8 GC+1d culture
CTTTGGGAGT
(
2
)
4.6
0.0046
P8 GC+SHH+1d culture
ATTCTGCACT (
6
)
14.1
0.0141
P8 GC+SHH+1d culture
CTTTGGGAGT
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
GCTGTGGGCT (
7
)
1.2
0.0012
3T3 fibroblasts
GCTGTGGGCT (
7
)
3.5
0.0035
E15 cortex
ATAGGGAGAG (
4
)
4.9
0.0049
E15 cortex
ATTCTGCACT (
6
)
4.9
0.0049
P1 cortex
CTTTGGGAGT
(
2
)
4.5
0.0045
Hypothalamus
ATTCTGCACT (
6
)
3.6
0.0036
Hypothalamus
ATTTGATTTG
(
6
)
3.6
0.0036
E12.5 retina
ATTCTGCACT (
6
)
1.9
0.0019
E12.5 retina
CTTTGGGAGT
(
2
)
1.9
0.0019
E14.5 retina
ATAGGGAGAG (
4
)
1.8
0.0018
E16.5 retina
ATTCTGCACT (
6
)
1.8
0.0018
E18.5 retina
CTTTGGGAGT
(
2
)
1.8
0.0018
P0.5 retina
ATTCTGCACT (
6
)
2
0.002
P0.5 retina
CAAACAGGCA (
3
)
2
0.002
P2.5 retina
TGAACCCCCT
(
3
)
5.3
0.0053
P2.5 retina
CTTTGGGAGT
(
2
)
3.5
0.0035
P2.5 retina
GCTGTGGGCT (
7
)
1.8
0.0018
P4.5 retina
CTTTGGGAGT
(
2
)
4
0.004
P4.5 retina
ATTCTGCACT (
6
)
2
0.002
P6.5 retina
CTTTGGGAGT
(
2
)
5
0.005
P6.5 retina
ATTCTGCACT (
6
)
1.7
0.0017
P10.5 crx- retina
CTTTGGGAGT
(
2
)
5.6
0.0056
P10.5 crx- retina
ATTCTGCACT (
6
)
3.7
0.0037
P10.5 crx- retina
CAAACACGCA
(
2
)
1.9
0.0019
P10.5 crx+ retina
ATTCTGCACT (
6
)
3.8
0.0038
P10.5 crx+ retina
CTTTGGGAGT
(
2
)
3.8
0.0038
P10.5 crx+ retina
CAAACAGGCA (
3
)
1.9
0.0019
Adult retinal
ATTCTGCACT (
6
)
1.9
0.0019
Adult retinal
CAAACACGCA
(
2
)
1.9
0.0019
ONL
CTTTGGGAGT
(
2
)
5.7
0.0057
ONL
ATTCTGCACT (
6
)
1.9
0.0019
ONL
CAAACACGCA
(
2
)
1.9
0.0019
ONL
CAAACAGGCA (
3
)
1.9
0.0019
