Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.33903	Sema4d	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D	13		20354
Gene Ontology	development | extracellular space | integral to membrane | membrane | neurogenesis | nickel ion binding | protein complex assembly | receptor activity | urea metabolism
Human Homolog	SEMA4D[sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGAAGAAGA (7) 1.6 0.0016 Cb medulloblastoma GAGAAAAAGA (3) 6.9 0.0069 P8 GC+1d culture TAGAGGGTGA (3) 1.1 0.0011 P8 GC+SHH+1d culture GAGAAAAAGA (3) 3.5 0.0035 P8 GC+SHH+1d culture ATCTACCATT (3) 1.2 0.0012 P8 GC+SHH+1d culture CAAAAAAAGA (7) 1.2 0.0012 P8 GC+SHH+1d culture CAGAAGAAGA (7) 1.2 0.0012 P8 GC+SHH+1d culture TAGAGGGTGA (3) 1.2 0.0012 E15 cortex CAAAAAAAGA (7) 9.9 0.0099 P1 cortex ATCTACCATT (3) 4.5 0.0045 Hypothalamus GAGAAAAAGA (3) 5.4 0.0054 E12.5 retina GAGAAAAAGA (3) 1.9 0.0019 E14.5 retina GAGAAAAAGA (3) 10.9 0.0109 E14.5 retina TAGAGGGTGA (3) 1.8 0.0018 E16.5 retina ATCTACCATT (3) 1.8 0.0018 E16.5 retina GAGAAAAAGA (3) 1.8 0.0018 E18.5 retina GAGAAAAAGA (3) 3.6 0.0036 P0.5 retina ATCTACCATT (3) 2 0.002 P0.5 retina TTCATCAGCA (11) 2 0.002 P2.5 retina ATCTACCATT (3) 1.8 0.0018 P2.5 retina GAGAAAAAGA (3) 1.8 0.0018 P2.5 retina TAGAGGGTGA (3) 1.8 0.0018 P4.5 retina TAGAGGGTGA (3) 5.9 0.0059 P4.5 retina AAAGACAGAA (7) 2 0.002 P4.5 retina ATCTACCATT (3) 2 0.002 P6.5 retina ATCTACCATT (3) 1.7 0.0017 P6.5 retina TTCATCAGCA (11) 1.7 0.0017 P10.5 crx- retina GAGAAAAAGA (3) 3.7 0.0037 P10.5 crx+ retina AAAGACAGAA (7) 1.9 0.0019 P10.5 crx+ retina CAGAAGAAGA (7) 1.9 0.0019 P10.5 crx+ retina GAGAAAAAGA (3) 1.9 0.0019 P10.5 crx+ retina TAGAGGGTGA (3) 1.9 0.0019 Adult retinal TTCATCAGCA (11) 1.9 0.0019 ONL AAAGACAGAA (7) 1.9 0.0019