Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.340288	Pfas	phosphoribosylformylglycinamidine synthase (FGAR amidotransferase)	11		237823
Gene Ontology	transferase activity
Human Homolog	PFAS[phosphoribosylformylglycinamidine synthase (FGAR amidotransferase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC CGCCACCACG (19) 3.3 0.0033 P8 Cb GC TTATTGTGGG (5) 3.3 0.0033 P8 Cb GC GCATTTTCTT (6) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma CGCCACCACG (19) 6.9 0.0069 Cb medulloblastoma GCATTTTCTT (6) 4.6 0.0046 Cb medulloblastoma GGTGCTGGGA (14) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture GCATTTTCTT (6) 3.4 0.0034 P8 GC+1d culture CGCCACCACG (19) 2.3 0.0023 P8 GC+1d culture TTATTGTGGG (5) 2.3 0.0023 P8 GC+1d culture ATTAAAGGAG (3) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CGCCACCACG (19) 9.4 0.0094 P8 GC+SHH+1d culture GCATTTTCTT (6) 4.7 0.0047 P8 GC+SHH+1d culture TTATTGTGGG (5) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex CGCCACCACG (19) 9.9 0.0099 E15 cortex GGTGCTGGGA (14) 4.9 0.0049 E15 cortex TTATTGTGGG (5) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex CGCCACCACG (19) 4.5 0.0045 P1 cortex TTATTGTGGG (5) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus CGCCACCACG (19) 9.1 0.0091 Hypothalamus GGTGCTGGGA (14) 3.6 0.0036 Hypothalamus GCATTTTCTT (6) 1.8 0.0018 Hypothalamus TTATTGTGGG (5) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina TTATTGTGGG (5) 9.4 0.0094 E12.5 retina ATTAAAGGAG (3) 3.8 0.0038 E12.5 retina CGCCACCACG (19) 1.9 0.0019 E12.5 retina GGTGCTGGGA (14) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina CGCCACCACG (19) 1.8 0.0018 E14.5 retina GGTGCTGGGA (14) 1.8 0.0018 E14.5 retina TTATTGTGGG (5) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina CGCCACCACG (19) 9.1 0.0091 E16.5 retina GCATTTTCTT (6) 3.6 0.0036 E16.5 retina ATTAAAGGAG (3) 1.8 0.0018 E16.5 retina TTATTGTGGG (5) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina TTATTGTGGG (5) 3.6 0.0036 E18.5 retina CGCCACCACG (19) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina GGTGCTGGGA (14) 3.9 0.0039 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina CGCCACCACG (19) 8.8 0.0088 P2.5 retina GCATTTTCTT (6) 5.3 0.0053 P2.5 retina ATTAAAGGAG (3) 1.8 0.0018 P2.5 retina GGTGCTGGGA (14) 1.8 0.0018 P2.5 retina TTATTGTGGG (5) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina CGCCACCACG (19) 7.9 0.0079 P4.5 retina GCATTTTCTT (6) 5.9 0.0059 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina GCATTTTCTT (6) 10 0.01 P6.5 retina CGCCACCACG (19) 5 0.005 P6.5 retina GGTGCTGGGA (14) 3.3 0.0033 P6.5 retina TTATTGTGGG (5) 3.3 0.0033 P6.5 retina ATTAAAGGAG (3) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina GCATTTTCTT (6) 14.9 0.0149 P10.5 crx- retina CGCCACCACG (19) 7.4 0.0074 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina GCATTTTCTT (6) 9.6 0.0096 P10.5 crx+ retina CGCCACCACG (19) 3.8 0.0038 P10.5 crx+ retina GGTGCTGGGA (14) 1.9 0.0019 P10.5 crx+ retina TTATTGTGGG (5) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal CGCCACCACG (19) 24.1 0.0241 Adult retinal GGTGCTGGGA (14) 5.6 0.0056 Adult retinal GCATTTTCTT (6) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL CGCCACCACG (19) 15.3 0.0153 ONL GGTGCTGGGA (14) 5.7 0.0057 ONL TTATTGTGGG (5) 1.9 0.0019