Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.340658	Rpl27	ribosomal protein L27	11		19942
Gene Ontology	cytosolic ribosome (sensu Eukarya) | ribonucleoprotein complex | ribosome biogenesis | structural constituent of ribosome
Human Homolog	RPL27[ribosomal protein L27]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 92 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCACAAGGT (3) 73.4 0.0734 P8 Cb GC GCCAAGAAGA (4) 3.3 0.0033 P8 Cb GC CCCACAAGGA (3) 1.6 0.0016 P8 Cb GC GCCTGTAAGG 1.6 0.0016 P8 Cb GC GCTGTAAGGG (2) 1.6 0.0016 P8 Cb GC GGCAAGAAGA (5) 1.6 0.0016 P8 Cb GC GGGAAAAAAA (36) 1.6 0.0016 Cb medulloblastoma GGGAAAAAAA (36) 92.5 0.0925 Cb medulloblastoma CCCACAAGGT (3) 13.9 0.0139 Cb medulloblastoma CCCACAAGCT (3) 2.3 0.0023 P8 GC+1d culture CCCACAAGGT (3) 37.7 0.0377 P8 GC+1d culture AGGTGGTTGT (2) 2.3 0.0023 P8 GC+1d culture GCTGTAAGGG (2) 1.1 0.0011 P8 GC+1d culture GGGAAAAAAA (36) 1.1 0.0011 P8 GC+SHH+1d culture CCCACAAGGT (3) 42.2 0.0422 P8 GC+SHH+1d culture AGGTGGTTGT (2) 3.5 0.0035 P8 GC+SHH+1d culture ACTAGTGCTT (80) 1.2 0.0012 P8 GC+SHH+1d culture GGCAAGAAGA (5) 1.2 0.0012 P8 GC+SHH+1d culture GGGAAAAAAA (36) 1.2 0.0012 3T3 fibroblasts CCCACAAGGT (3) 119.2 0.1192 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GCCAAGAAGA (4) 3.5 0.0035 E15 cortex CCCACAAGGT (3) 39.6 0.0396 E15 cortex CCCACAAGCT (3) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex CCCACAAGGT (3) 13.6 0.0136 P1 cortex AAACCCGGGA (2) 4.5 0.0045 P1 cortex GGGAAAAAAA (36) 4.5 0.0045 Hypothalamus GGGAAAAAAA (36) 41.7 0.0417 Hypothalamus CCCACAAGGT (3) 16.3 0.0163 Hypothalamus CCCACAAGCT (3) 1.8 0.0018 Hypothalamus GCAGCTGTCA 1.8 0.0018 E12.5 retina CCCACAAGGT (3) 65.7 0.0657 E12.5 retina GCTGTAAGGG (2) 11.3 0.0113 E12.5 retina ACTAGTGCTT (80) 1.9 0.0019 E12.5 retina AGGTGGTTGT (2) 1.9 0.0019 E14.5 retina CCCACAAGGT (3) 14.6 0.0146 E14.5 retina GCAGCTGTCA 3.6 0.0036 E14.5 retina AAACCCGGGA (2) 1.8 0.0018 E14.5 retina AGGTGGTTGT (2) 1.8 0.0018 E14.5 retina GGCAAGAAGA (5) 1.8 0.0018 E14.5 retina GGCAATAACA (3) 1.8 0.0018 E14.5 retina GGGAAAAAAA (36) 1.8 0.0018 E16.5 retina CCCACAAGGT (3) 43.5 0.0435 E16.5 retina AAACCCGGGA (2) 3.6 0.0036 E16.5 retina GCTGTAAGGG (2) 3.6 0.0036 E16.5 retina GGGAAAAAAA (36) 3.6 0.0036 E16.5 retina AGGTGGTTGT (2) 1.8 0.0018 E16.5 retina CATTTCAATT (3) 1.8 0.0018 E16.5 retina GCCTGTAAGG 1.8 0.0018 E18.5 retina CCCACAAGGT (3) 18.2 0.0182 E18.5 retina GCTGTAAGGG (2) 3.6 0.0036 E18.5 retina GGCAATAACA (3) 1.8 0.0018 E18.5 retina GGGAAAAAAA (36) 1.8 0.0018 P0.5 retina CCCACAAGGT (3) 76.5 0.0765 P0.5 retina GGGAAAAAAA (36) 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina AGGTGGTTGT (2) 2 0.002 P0.5 retina CCCACAAGGA (3) 2 0.002 P2.5 retina CCCACAAGGT (3) 31.7 0.0317 P2.5 retina GGGAAAAAAA (36) 7 0.007 P2.5 retina GCAGCTGTCA 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina CCCACAAGGT (3) 21.8 0.0218 P4.5 retina GGGAAAAAAA (36) 9.9 0.0099 P4.5 retina ACTAGTGCTT (80) 2 0.002 P4.5 retina GCTGTAAGGG (2) 2 0.002 P4.5 retina GGCAAGAAGA (5) 2 0.002 P4.5 retina GGCAATAACA (3) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina CCCACAAGGT (3) 28.3 0.0283 P6.5 retina GGGAAAAAAA (36) 20 0.02 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina GCTGTAAGGG (2) 1.7 0.0017 P6.5 retina GGCAATAACA (3) 1.7 0.0017 P10.5 crx- retina CCCACAAGGT (3) 91 0.091 P10.5 crx- retina GGGAAAAAAA (36) 11.1 0.0111 P10.5 crx- retina AGGTGGTTGT (2) 3.7 0.0037 P10.5 crx+ retina CCCACAAGGT (3) 25 0.025 P10.5 crx+ retina GGGAAAAAAA (36) 23.1 0.0231 P10.5 crx+ retina AGGTGGTTGT (2) 1.9 0.0019 Adult retinal GGGAAAAAAA (36) 35.2 0.0352 Adult retinal CCCACAAGGT (3) 18.5 0.0185 Adult retinal AGGTGGTTGT (2) 1.9 0.0019 Adult retinal CATTTCAATT (3) 1.9 0.0019 Adult retinal GCTGTAAGGG (2) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL CCCACAAGGT (3) 30.6 0.0306 ONL GGGAAAAAAA (36) 30.6 0.0306 ONL GTCATAGCTG (590) 5.7 0.0057 ONL GCTGTAAGGG (2) 3.8 0.0038 ONL GGCAATAACA (3) 1.9 0.0019