Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.340911
2610019A05Rik
RIKEN cDNA 2610019A05 gene
11
72149
Mm.340911
E130112C09Rik
RIKEN cDNA E130112C09 gene
11
77993
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 68 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
P8 Cb GC
TGCACACACA (
29
)
8.2
0.0082
P8 Cb GC
AATGAACTGG (
7
)
1.6
0.0016
P8 Cb GC
GGCTATGTGC (
5
)
1.6
0.0016
P8 Cb GC
TCTTGCCTCA
(
2
)
1.6
0.0016
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
TCTTGCCTCA
(
2
)
4.6
0.0046
Cb medulloblastoma
TGCACACACA (
29
)
2.3
0.0023
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
TGCACACACA (
29
)
9.1
0.0091
P8 GC+1d culture
GGCTATGTGC (
5
)
3.4
0.0034
P8 GC+1d culture
TCTTGCCTCA
(
2
)
2.3
0.0023
P8 GC+1d culture
AATGAACTGG (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
TGCACACACA (
29
)
16.4
0.0164
P8 GC+SHH+1d culture
GGCTATGTGC (
5
)
4.7
0.0047
P8 GC+SHH+1d culture
TCTTGCCTCA
(
2
)
1.2
0.0012
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
3T3 fibroblasts
GGCTATGTGC (
5
)
14
0.014
3T3 fibroblasts
TGCACACACA (
29
)
14
0.014
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
P1 cortex
TGCACACACA (
29
)
4.5
0.0045
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
Hypothalamus
TGCACACACA (
29
)
1.8
0.0018
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
GGCTATGTGC (
5
)
5.6
0.0056
E12.5 retina
TGCACACACA (
29
)
5.6
0.0056
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
TGCACACACA (
29
)
9.1
0.0091
E14.5 retina
AATGAACTGG (
7
)
3.6
0.0036
E14.5 retina
TCTTGCCTCA
(
2
)
3.6
0.0036
E14.5 retina
GGCTATGTGC (
5
)
1.8
0.0018
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
TGCACACACA (
29
)
9.1
0.0091
E16.5 retina
GGCTATGTGC (
5
)
1.8
0.0018
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
TGCACACACA (
29
)
7.3
0.0073
E18.5 retina
GGCTATGTGC (
5
)
1.8
0.0018
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
GGCTATGTGC (
5
)
5.9
0.0059
P0.5 retina
TCTTGCCTCA
(
2
)
2
0.002
P0.5 retina
TGCACACACA (
29
)
2
0.002
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
TGCACACACA (
29
)
3.5
0.0035
P2.5 retina
AATGAACTGG (
7
)
1.8
0.0018
P2.5 retina
TCTTGCCTCA
(
2
)
1.8
0.0018
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
GGCTATGTGC (
5
)
4
0.004
P4.5 retina
AATGAACTGG (
7
)
2
0.002
P4.5 retina
TGCACACACA (
29
)
2
0.002
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
TGCACACACA (
29
)
11.7
0.0117
P6.5 retina
GGCTATGTGC (
5
)
3.3
0.0033
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
GGCTATGTGC (
5
)
3.7
0.0037
P10.5 crx- retina
TGCACACACA (
29
)
3.7
0.0037
P10.5 crx- retina
TCTTGCCTCA
(
2
)
1.9
0.0019
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
TGCACACACA (
29
)
9.6
0.0096
P10.5 crx+ retina
GGCTATGTGC (
5
)
1.9
0.0019
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
TGCACACACA (
29
)
9.3
0.0093
Adult retinal
AATGAACTGG (
7
)
3.7
0.0037
Adult retinal
GGCTATGTGC (
5
)
3.7
0.0037
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
TGCACACACA (
29
)
15.3
0.0153
ONL
TCTTGCCTCA
(
2
)
1.9
0.0019
