Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.341434	Lgals9	lectin, galactose binding, soluble 9	11		16859
Gene Ontology	sugar binding
Human Homolog	LGALS9[lectin, galactoside-binding, soluble, 9 (galectin 9)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC GCCGTCAGCC (4) 8.2 0.0082 P8 Cb GC AAATAAAGAA (3) 1.6 0.0016 P8 Cb GC GCTGTCAGCC 1.6 0.0016 P8 Cb GC TCTAAAAAAA (15) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma TCTAAAAAAA (15) 13.9 0.0139 Cb medulloblastoma GCCGTCAGCC (4) 9.2 0.0092 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture GCTGTCAGCC 16 0.016 P8 GC+1d culture GCCGTCAGCC (4) 10.3 0.0103 P8 GC+1d culture TCTAAAAAAA (15) 6.8 0.0068 P8 GC+1d culture TCTGCCAGAA (2) 2.3 0.0023 P8 GC+1d culture TGTGAATATT (3) 2.3 0.0023 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture GCTGTCAGCC 8.2 0.0082 P8 GC+SHH+1d culture GCCGTCAGCC (4) 4.7 0.0047 P8 GC+SHH+1d culture AAATAAAGAA (3) 3.5 0.0035 P8 GC+SHH+1d culture TCTAAAAAAA (15) 3.5 0.0035 P8 GC+SHH+1d culture TGTGAATATT (3) 2.3 0.0023 P8 GC+SHH+1d culture GGCTGTAAGG (2) 1.2 0.0012 P8 GC+SHH+1d culture TCTGCCAGAA (2) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GCTGTCAGCC 14 0.014 3T3 fibroblasts GCCGTCAGCC (4) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GCCGTCAGCC (4) 9.9 0.0099 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex TCTAAAAAAA (15) 9.1 0.0091 P1 cortex TCTGCCAGAA (2) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus TCTAAAAAAA (15) 10.9 0.0109 Hypothalamus GCCGTCAGCC (4) 5.4 0.0054 Hypothalamus TCTGCCAGAA (2) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina GCCGTCAGCC (4) 3.8 0.0038 E12.5 retina TCTAAAAAAA (15) 3.8 0.0038 E12.5 retina AAATAAAGAA (3) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina GCCGTCAGCC (4) 5.5 0.0055 E14.5 retina TCTAAAAAAA (15) 5.5 0.0055 E14.5 retina GGCTGTAAGG (2) 3.6 0.0036 E14.5 retina GCCTCAAACT (2) 1.8 0.0018 E14.5 retina TGTGAATATT (3) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GCCGTCAGCC (4) 5.4 0.0054 E16.5 retina TCTAAAAAAA (15) 3.6 0.0036 E16.5 retina TGTGAATATT (3) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TCTAAAAAAA (15) 10.9 0.0109 E18.5 retina GCCGTCAGCC (4) 7.3 0.0073 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina TCTGCCAGAA (2) 7.9 0.0079 P0.5 retina TCTAAAAAAA (15) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GCCGTCAGCC (4) 12.3 0.0123 P2.5 retina TCTAAAAAAA (15) 5.3 0.0053 P2.5 retina AAATAAAGAA (3) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina GCCGTCAGCC (4) 11.9 0.0119 P4.5 retina TCTAAAAAAA (15) 11.9 0.0119 P4.5 retina TGTGAATATT (3) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina GCCGTCAGCC (4) 13.3 0.0133 P6.5 retina TCTAAAAAAA (15) 10 0.01 P6.5 retina AAATAAAGAA (3) 6.7 0.0067 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GCCGTCAGCC (4) 3.7 0.0037 P10.5 crx- retina TGTGAATATT (3) 3.7 0.0037 P10.5 crx- retina AAATAAAGAA (3) 1.9 0.0019 P10.5 crx- retina TCTAAAAAAA (15) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GCCGTCAGCC (4) 15.4 0.0154 P10.5 crx+ retina TCTAAAAAAA (15) 3.8 0.0038 P10.5 crx+ retina TGTGAATATT (3) 3.8 0.0038 P10.5 crx+ retina AAATAAAGAA (3) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal GCCGTCAGCC (4) 11.1 0.0111 Adult retinal TCTGCCAGAA (2) 5.6 0.0056 Adult retinal TCTAAAAAAA (15) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GCCGTCAGCC (4) 5.7 0.0057 ONL GCCTCAAACT (2) 3.8 0.0038 ONL TCTAAAAAAA (15) 3.8 0.0038 ONL AAATAAAGAA (3) 1.9 0.0019