Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.34210	Ctxn	cortexin	8	8 A1.1 (8 13.0 cM)	330695
Gene Ontology	integral to membrane
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAAGCAGAA 6.5 0.0065 P8 Cb GC CCCTTCCCTT (9) 4.9 0.0049 P8 Cb GC TGAAGCAAAA (7) 3.3 0.0033 P8 Cb GC CTACATTCTT 1.6 0.0016 P8 Cb GC TGAAGCAGAT (2) 1.6 0.0016 Cb medulloblastoma GTGGGGTTTC (3) 2.3 0.0023 P8 GC+1d culture CCCTTCCCTT (9) 14.8 0.0148 P8 GC+1d culture GCTGCTGCTT (6) 8 0.008 P8 GC+1d culture TGAAGCAGAA 4.6 0.0046 P8 GC+1d culture TGAAGCAGAT (2) 4.6 0.0046 P8 GC+SHH+1d culture CCCTTCCCTT (9) 17.6 0.0176 P8 GC+SHH+1d culture TGAAGCAGAA 3.5 0.0035 P8 GC+SHH+1d culture GCTGCTGCTT (6) 2.3 0.0023 P8 GC+SHH+1d culture CTACATTCTT 1.2 0.0012 3T3 fibroblasts CCCTTCCCTT (9) 3.5 0.0035 E15 cortex CCCTTCCCTT (9) 24.7 0.0247 E15 cortex GCTGCTGCTT (6) 4.9 0.0049 E15 cortex GTGGGGTTTC (3) 4.9 0.0049 P1 cortex CCCTTCCCTT (9) 18.2 0.0182 P1 cortex GCTGCTGCTT (6) 4.5 0.0045 P1 cortex TGAAGCAGAA 4.5 0.0045 Hypothalamus CCCTTCCCTT (9) 5.4 0.0054 Hypothalamus GCTGCTGCTT (6) 5.4 0.0054 Hypothalamus TGAAGCAGAA 3.6 0.0036 Hypothalamus CCTGCCTGCT (8) 1.8 0.0018 Hypothalamus TGAAGCAGAT (2) 1.8 0.0018 E12.5 retina CCCTTCCCTT (9) 16.9 0.0169 E12.5 retina TGAAGCAAAA (7) 3.8 0.0038 E12.5 retina TGAAGCAGAA 3.8 0.0038 E12.5 retina GCTGCTGCTT (6) 1.9 0.0019 E12.5 retina GTGGGGTTTC (3) 1.9 0.0019 E14.5 retina CCCTTCCCTT (9) 10.9 0.0109 E14.5 retina TGAAGCAAAA (7) 3.6 0.0036 E14.5 retina TGAAGCAGAA 1.8 0.0018 E16.5 retina CCCTTCCCTT (9) 41.7 0.0417 E16.5 retina TGAAGCAGAA 12.7 0.0127 E16.5 retina GCTGCTGCTT (6) 5.4 0.0054 E16.5 retina TGAAGCAGAT (2) 3.6 0.0036 E16.5 retina CTACATTCTT 1.8 0.0018 E18.5 retina TGAAGCAGAA 16.4 0.0164 E18.5 retina CCCTTCCCTT (9) 9.1 0.0091 E18.5 retina TGAAGCAAAA (7) 5.5 0.0055 E18.5 retina CCTGCCTGCT (8) 1.8 0.0018 P0.5 retina CCCTTCCCTT (9) 37.3 0.0373 P0.5 retina GCTGCTGCTT (6) 5.9 0.0059 P0.5 retina TGAAGCAGAA 3.9 0.0039 P2.5 retina CCCTTCCCTT (9) 17.6 0.0176 P2.5 retina TGAAGCAGAA 7 0.007 P2.5 retina TGAAGCAAAA (7) 3.5 0.0035 P2.5 retina GCTGCTGCTT (6) 1.8 0.0018 P4.5 retina TGAAGCAGAA 11.9 0.0119 P4.5 retina CCCTTCCCTT (9) 5.9 0.0059 P4.5 retina CCTGCCTGCT (8) 2 0.002 P6.5 retina CCCTTCCCTT (9) 15 0.015 P6.5 retina TGAAGCAGAA 5 0.005 P6.5 retina GCTGCTGCTT (6) 1.7 0.0017 P6.5 retina TGAAGCAGAT (2) 1.7 0.0017 P10.5 crx- retina CCCTTCCCTT (9) 3.7 0.0037 P10.5 crx- retina TGAAGCAGAA 3.7 0.0037 P10.5 crx+ retina CCCTTCCCTT (9) 3.8 0.0038 P10.5 crx+ retina GCTGCTGCTT (6) 1.9 0.0019 P10.5 crx+ retina TGAAGCAGAA 1.9 0.0019 Adult retinal CCCTTCCCTT (9) 5.6 0.0056 Adult retinal GCTGCTGCTT (6) 1.9 0.0019 ONL TGAAGCAGAA 1.9 0.0019