Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.34374	Ctrb1	chymotrypsinogen B1	8	8 57.0 cM	66473
Gene Ontology	chymotrypsin activity | chymotrypsin activity | digestion | extracellular space | hydrolase activity | peptidase activity | proteolysis and peptidolysis | serine-type endopeptidase activity | trypsin activity
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 199 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCTGGGTTC (6) 17.9 0.0179 P8 Cb GC GCTGACTCCG (3) 9.8 0.0098 P8 Cb GC GGAAAAAAAA (69) 8.2 0.0082 P8 Cb GC GCATTCCTCT (3) 4.9 0.0049 P8 Cb GC TGCAAAAAAA (21) 4.9 0.0049 P8 Cb GC TGCAATAAAA (7) 4.9 0.0049 P8 Cb GC CCCCTGGGGT (6) 3.3 0.0033 P8 Cb GC CCCTCAAGAA (3) 1.6 0.0016 P8 Cb GC GGGTGGGGGA (14) 1.6 0.0016 P8 Cb GC GGTGGACTCT (5) 1.6 0.0016 Cb medulloblastoma GGAAAAAAAA (69) 41.6 0.0416 Cb medulloblastoma TGCAATAAAA (7) 32.4 0.0324 Cb medulloblastoma TGCAAAAAAA (21) 13.9 0.0139 Cb medulloblastoma GCTGACTCCG (3) 6.9 0.0069 Cb medulloblastoma CCCTGGGTTC (6) 4.6 0.0046 Cb medulloblastoma GGGGTCCAGA (3) 4.6 0.0046 Cb medulloblastoma CTTCTCTTCT (9) 2.3 0.0023 Cb medulloblastoma GAATTAGAAA (5) 2.3 0.0023 Cb medulloblastoma GACAGAGGCC (3) 2.3 0.0023 Cb medulloblastoma GCATTCCTCT (3) 2.3 0.0023 Cb medulloblastoma GGTGGACTCT (5) 2.3 0.0023 P8 GC+1d culture CCCTGGGTTC (6) 114.2 0.1142 P8 GC+1d culture TGCAATAAAA (7) 10.3 0.0103 P8 GC+1d culture TGCAAAAAAA (21) 9.1 0.0091 P8 GC+1d culture GGAAAAAAAA (69) 5.7 0.0057 P8 GC+1d culture GACAGAGGCC (3) 4.6 0.0046 P8 GC+1d culture CCCTCAAGAA (3) 2.3 0.0023 P8 GC+1d culture GCATTCCTCT (3) 2.3 0.0023 P8 GC+1d culture GCTGACTCCG (3) 2.3 0.0023 P8 GC+1d culture GGCAATAAAA (4) 2.3 0.0023 P8 GC+1d culture ATGCCCTGCC (3) 1.1 0.0011 P8 GC+1d culture CCTGCCTGCC (9) 1.1 0.0011 P8 GC+1d culture GGGGTCCAGA (3) 1.1 0.0011 P8 GC+1d culture GGTGGACTCT (5) 1.1 0.0011 P8 GC+SHH+1d culture CCCTGGGTTC (6) 67.9 0.0679 P8 GC+SHH+1d culture TGCAAAAAAA (21) 15.2 0.0152 P8 GC+SHH+1d culture TGCAATAAAA (7) 12.9 0.0129 P8 GC+SHH+1d culture GGAAAAAAAA (69) 7 0.007 P8 GC+SHH+1d culture GCTGACTCCG (3) 4.7 0.0047 P8 GC+SHH+1d culture CCCCTGGGGT (6) 2.3 0.0023 P8 GC+SHH+1d culture ATGCCCTGCC (3) 1.2 0.0012 P8 GC+SHH+1d culture CCCTCAAGAA (3) 1.2 0.0012 P8 GC+SHH+1d culture CCCTGGGTTT (3) 1.2 0.0012 P8 GC+SHH+1d culture GACAGAGGCC (3) 1.2 0.0012 P8 GC+SHH+1d culture GGGGTCCAGA (3) 1.2 0.0012 P8 GC+SHH+1d culture GGGTGGGGGA (14) 1.2 0.0012 3T3 fibroblasts CCCTGGGTTC (6) 708 0.708 3T3 fibroblasts CCCCTGGGGT (6) 14 0.014 3T3 fibroblasts GCATTTCCTT (5) 7 0.007 3T3 fibroblasts GCTGACTCCG (3) 7 0.007 3T3 fibroblasts GGGGTCCAGA (3) 7 0.007 3T3 fibroblasts CCCTCAAGAA (3) 3.5 0.0035 3T3 fibroblasts CCCTGGGTTT (3) 3.5 0.0035 3T3 fibroblasts TGCAATAAAA (7) 3.5 0.0035 E15 cortex CCCTGGGTTC (6) 143.5 0.1435 E15 cortex GGAAAAAAAA (69) 9.9 0.0099 E15 cortex TGCAATAAAA (7) 4.9 0.0049 P1 cortex CCCTGGGTTC (6) 68.2 0.0682 P1 cortex CCCCTGGGGT (6) 9.1 0.0091 P1 cortex TGCAATAAAA (7) 9.1 0.0091 P1 cortex GCCCTGGGGG (4) 4.5 0.0045 P1 cortex GCTGACTCCG (3) 4.5 0.0045 P1 cortex GGAAAAAAAA (69) 4.5 0.0045 P1 cortex GGGGTCCAGA (3) 4.5 0.0045 P1 cortex GGGTGGGGGA (14) 4.5 0.0045 Hypothalamus GGAAAAAAAA (69) 14.5 0.0145 Hypothalamus GGGTGGGGGA (14) 9.1 0.0091 Hypothalamus TGCAAAAAAA (21) 9.1 0.0091 Hypothalamus CCCTGGGTTC (6) 5.4 0.0054 Hypothalamus TGCAATAAAA (7) 5.4 0.0054 Hypothalamus ATGCCCTGCC (3) 3.6 0.0036 Hypothalamus CTTCTCTTCT (9) 3.6 0.0036 Hypothalamus GCATTCCTCT (3) 3.6 0.0036 Hypothalamus GCCCTGGGTT (7) 3.6 0.0036 Hypothalamus GCATTTCCTT (5) 1.8 0.0018 Hypothalamus GCCCTGGGGG (4) 1.8 0.0018 Hypothalamus GGCAATAAAA (4) 1.8 0.0018 E12.5 retina CCCTGGGTTC (6) 35.7 0.0357 E12.5 retina GCTGACTCCG (3) 7.5 0.0075 E12.5 retina TGCAATAAAA (7) 7.5 0.0075 E12.5 retina TACAATAAAA 3.8 0.0038 E12.5 retina CCTGCCTGCC (9) 1.9 0.0019 E12.5 retina GCCCTGGGGG (4) 1.9 0.0019 E12.5 retina GGAAAAAAAA (69) 1.9 0.0019 E12.5 retina GGCAATAAAA (4) 1.9 0.0019 E12.5 retina GGGTGGGGGA (14) 1.9 0.0019 E12.5 retina TGCAAAAAAA (21) 1.9 0.0019 E14.5 retina CCCTGGGTTC (6) 14.6 0.0146 E14.5 retina GGAAAAAAAA (69) 10.9 0.0109 E14.5 retina TGCAATAAAA (7) 7.3 0.0073 E14.5 retina GCTGACTCCG (3) 5.5 0.0055 E14.5 retina CCCTGGGTTT (3) 1.8 0.0018 E14.5 retina CTTCTCTTCT (9) 1.8 0.0018 E14.5 retina GCATTTTTTT (9) 1.8 0.0018 E14.5 retina GCCCTGGGTT (7) 1.8 0.0018 E14.5 retina GGTGGACTCT (5) 1.8 0.0018 E14.5 retina TGCAAAAAAA (21) 1.8 0.0018 E16.5 retina CCCTGGGTTC (6) 47.1 0.0471 E16.5 retina GCTGACTCCG (3) 7.2 0.0072 E16.5 retina TGCAAAAAAA (21) 5.4 0.0054 E16.5 retina TGCAATAAAA (7) 5.4 0.0054 E16.5 retina GCATTCCTCT (3) 3.6 0.0036 E16.5 retina ATGCCCTGCC (3) 1.8 0.0018 E16.5 retina GAATTAGAAA (5) 1.8 0.0018 E16.5 retina GCCCTGGGGG (4) 1.8 0.0018 E16.5 retina GGAAAAAAAA (69) 1.8 0.0018 E16.5 retina GGGGTCCAGA (3) 1.8 0.0018 E18.5 retina TGCAATAAAA (7) 23.6 0.0236 E18.5 retina TGCAAAAAAA (21) 20 0.02 E18.5 retina GGAAAAAAAA (69) 16.4 0.0164 E18.5 retina CCCTGGGTTC (6) 12.7 0.0127 E18.5 retina GCTGACTCCG (3) 10.9 0.0109 E18.5 retina GCCCTGGGTT (7) 3.6 0.0036 E18.5 retina GACAGAGGCC (3) 1.8 0.0018 E18.5 retina GCATTTCCTT (5) 1.8 0.0018 E18.5 retina GGGTGGGGGA (14) 1.8 0.0018 P0.5 retina CCCTGGGTTC (6) 76.5 0.0765 P0.5 retina TGCAATAAAA (7) 17.7 0.0177 P0.5 retina GGAAAAAAAA (69) 13.7 0.0137 P0.5 retina CCCCTGGGGT (6) 9.8 0.0098 P0.5 retina TGCAAAAAAA (21) 7.9 0.0079 P0.5 retina ATGCCCTGCC (3) 2 0.002 P0.5 retina CCCTGGGTTT (3) 2 0.002 P0.5 retina GAATTAGAAA (5) 2 0.002 P0.5 retina GCTGACTCCG (3) 2 0.002 P0.5 retina GGTGGACTCT (5) 2 0.002 P2.5 retina CCCTGGGTTC (6) 15.8 0.0158 P2.5 retina TGCAATAAAA (7) 14.1 0.0141 P2.5 retina GGAAAAAAAA (69) 7 0.007 P2.5 retina GCATTCCTCT (3) 5.3 0.0053 P2.5 retina GCTGACTCCG (3) 5.3 0.0053 P2.5 retina TGCAAAAAAA (21) 3.5 0.0035 P2.5 retina ATGCCCTGCC (3) 1.8 0.0018 P2.5 retina CCCCTGGGGT (6) 1.8 0.0018 P2.5 retina CCCTCAAGAA (3) 1.8 0.0018 P2.5 retina GCATTTCCTT (5) 1.8 0.0018 P2.5 retina GGGGTCCAGA (3) 1.8 0.0018 P4.5 retina CCCTGGGTTC (6) 31.7 0.0317 P4.5 retina TGCAATAAAA (7) 15.9 0.0159 P4.5 retina GGAAAAAAAA (69) 13.9 0.0139 P4.5 retina CCCTGGGTTT (3) 4 0.004 P4.5 retina TGCAAAAAAA (21) 4 0.004 P4.5 retina CCCCTGGGGT (6) 2 0.002 P4.5 retina GCATTCCTCT (3) 2 0.002 P4.5 retina GCATTTTTTT (9) 2 0.002 P4.5 retina GGGTGGGGGA (14) 2 0.002 P6.5 retina CCCTGGGTTC (6) 45 0.045 P6.5 retina TGCAATAAAA (7) 18.3 0.0183 P6.5 retina GGAAAAAAAA (69) 13.3 0.0133 P6.5 retina GCTGACTCCG (3) 5 0.005 P6.5 retina TGCAAAAAAA (21) 5 0.005 P6.5 retina CCCTCAAGAA (3) 3.3 0.0033 P6.5 retina GCATTCCTCT (3) 3.3 0.0033 P6.5 retina GGGGTCCAGA (3) 3.3 0.0033 P6.5 retina GGGTGGGGGA (14) 3.3 0.0033 P6.5 retina CCCCTGGGGT (6) 1.7 0.0017 P6.5 retina GCATTTTTTT (9) 1.7 0.0017 P6.5 retina GGCAATAAAA (4) 1.7 0.0017 P10.5 crx- retina CCCTGGGTTC (6) 83.6 0.0836 P10.5 crx- retina GCATTCCTCT (3) 14.9 0.0149 P10.5 crx- retina TGCAATAAAA (7) 11.1 0.0111 P10.5 crx- retina CCCTCAAGAA (3) 7.4 0.0074 P10.5 crx- retina GCTGACTCCG (3) 7.4 0.0074 P10.5 crx- retina GGGTGGGGGA (14) 5.6 0.0056 P10.5 crx- retina GCTGATTTTC (2) 3.7 0.0037 P10.5 crx- retina GGAAAAAAAA (69) 3.7 0.0037 P10.5 crx- retina GACAGAGGCC (3) 1.9 0.0019 P10.5 crx- retina GGGGTCCAGA (3) 1.9 0.0019 P10.5 crx- retina TTGTTAAGAA (3) 1.9 0.0019 P10.5 crx+ retina TGCAATAAAA (7) 19.2 0.0192 P10.5 crx+ retina GCATTCCTCT (3) 15.4 0.0154 P10.5 crx+ retina GGAAAAAAAA (69) 15.4 0.0154 P10.5 crx+ retina TGCAAAAAAA (21) 9.6 0.0096 P10.5 crx+ retina CCCTGGGTTC (6) 5.8 0.0058 P10.5 crx+ retina GCTGACTCCG (3) 5.8 0.0058 P10.5 crx+ retina GGGGTCCAGA (3) 5.8 0.0058 P10.5 crx+ retina CCTGCCTGCC (9) 1.9 0.0019 P10.5 crx+ retina GACAGAGGCC (3) 1.9 0.0019 P10.5 crx+ retina GCATTTCCTT (5) 1.9 0.0019 P10.5 crx+ retina GGGTGGGGGA (14) 1.9 0.0019 P10.5 crx+ retina TTGTTAAGAA (3) 1.9 0.0019 Adult retinal CCCTGGGTTC (6) 31.5 0.0315 Adult retinal TGCAATAAAA (7) 7.4 0.0074 Adult retinal GGAAAAAAAA (69) 5.6 0.0056 Adult retinal TGCAAAAAAA (21) 5.6 0.0056 Adult retinal CCCCTGGGGT (6) 3.7 0.0037 Adult retinal CCTGCCTGCC (9) 3.7 0.0037 Adult retinal GCATTCCTCT (3) 3.7 0.0037 Adult retinal GGGTGGGGGA (14) 3.7 0.0037 Adult retinal GCTGACTCCG (3) 1.9 0.0019 Adult retinal GGGGTCCAGA (3) 1.9 0.0019 ONL GGAAAAAAAA (69) 17.2 0.0172 ONL CCCTGGGTTC (6) 9.6 0.0096 ONL TGCAAAAAAA (21) 7.7 0.0077 ONL TGCAATAAAA (7) 7.7 0.0077 ONL GCATTCCTCT (3) 3.8 0.0038 ONL GCCCTGGGTT (7) 3.8 0.0038 ONL CCCTCAAGAA (3) 1.9 0.0019 ONL TTGTTAAGAA (3) 1.9 0.0019