Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.34405	Casp3	caspase 3, apoptosis related cysteine protease	8	8 26.0 cM	12367
Gene Ontology	apoptosis | B-cell homeostasis | caspase activity | caspase activity | cell fate commitment | cyclin-dependent protein kinase inhibitor activity | cysteine-type peptidase activity | cytoplasm | hydrolase activity | induction of apoptosis | induction of apoptosis | induction of apoptosis | induction of apoptosis by oxidative stress | induction of apoptosis via death domain receptors | keratinocyte differentiation | negative regulation of activated T-cell proliferation | negative regulation of B-cell proliferation | negative regulation of CDK activity | negative regulation of cell cycle | peptidase activity | peptidase activity | proteolysis and peptidolysis | response to wounding | T-cell homeostasis
Human Homolog	CASP3[caspase 3, apoptosis-related cysteine protease]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 44 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGACAATTTT (3) 9.8 0.0098 P8 Cb GC CATTATAGCT 3.3 0.0033 P8 Cb GC TTTTATTACT (3) 3.3 0.0033 Cb medulloblastoma TGACAATTTT (3) 2.3 0.0023 P8 GC+1d culture TGACAATTTT (3) 21.7 0.0217 P8 GC+1d culture TTTTATTACT (3) 1.1 0.0011 P8 GC+SHH+1d culture TGACAATTTT (3) 28.1 0.0281 P8 GC+SHH+1d culture CATTATAGCT 2.3 0.0023 P8 GC+SHH+1d culture TTTTATTACT (3) 2.3 0.0023 P8 GC+SHH+1d culture CTGACTTTTC (5) 1.2 0.0012 E15 cortex TGACAATTTT (3) 44.5 0.0445 E15 cortex CTGACTTTTC (5) 9.9 0.0099 E15 cortex CTGGAAGCTG (5) 4.9 0.0049 P1 cortex TGACAATTTT (3) 18.2 0.0182 Hypothalamus CTGGAAGCTG (5) 5.4 0.0054 Hypothalamus TGACAATTTT (3) 3.6 0.0036 Hypothalamus GGCCTGAAAT (5) 1.8 0.0018 Hypothalamus GGGATGAAGG (2) 1.8 0.0018 E12.5 retina TGACAATTTT (3) 5.6 0.0056 E12.5 retina TTTTATTACT (3) 1.9 0.0019 E14.5 retina TGACAATTTT (3) 12.8 0.0128 E16.5 retina TGACAATTTT (3) 19.9 0.0199 E16.5 retina CATTATAGCT 1.8 0.0018 E16.5 retina GGCCTGAAAT (5) 1.8 0.0018 E18.5 retina TGACAATTTT (3) 32.7 0.0327 E18.5 retina TTTTATTACT (3) 1.8 0.0018 P0.5 retina TGACAATTTT (3) 17.7 0.0177 P2.5 retina TGACAATTTT (3) 15.8 0.0158 P2.5 retina CATTATAGCT 1.8 0.0018 P2.5 retina CTGGAAGCTG (5) 1.8 0.0018 P2.5 retina GGCCTGAAAT (5) 1.8 0.0018 P2.5 retina TTTTATTACT (3) 1.8 0.0018 P4.5 retina TGACAATTTT (3) 19.8 0.0198 P6.5 retina TGACAATTTT (3) 6.7 0.0067 P6.5 retina CATTATAGCT 5 0.005 P6.5 retina GGCCTGAAAT (5) 1.7 0.0017 P6.5 retina GGGATGAAGG (2) 1.7 0.0017 P6.5 retina TTTTATTACT (3) 1.7 0.0017 P10.5 crx- retina TGACAATTTT (3) 11.1 0.0111 P10.5 crx- retina GGGATGAAGG (2) 3.7 0.0037 P10.5 crx+ retina TGACAATTTT (3) 3.8 0.0038 Adult retinal CTGACTTTTC (5) 1.9 0.0019 Adult retinal TGACAATTTT (3) 1.9 0.0019 ONL CTGACTTTTC (5) 1.9 0.0019